RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 WDFY3Q8IZQ1 3526 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 M0R1X1 148 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 DVL1O14640 695 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 CRHP06850 196 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 BAXQ07812 192 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 ASPHD2Q6ICH7 369 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 FGFBP3Q8TAT2 258 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 KLF14Q8TD94 323 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 GPHA2Q96T91 129 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 CCL28Q9NRJ3 127 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 MSRB2Q9Y3D2 182 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGKV1-9A0A0C4DH69 117 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 APOA2P02652 100 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 GAPTQ8N292 157 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMEM210A6NLX4 147 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 MFNGO00587 321 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 ADAM20O43506 726 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 CD3EP07766 207 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 FGF8P55075 233 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 CTAG1AP78358 180 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 GABRA6Q16445 453 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 SPACA3Q8IXA5 215 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 C22orf15Q8WYQ4 148 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 SPRR3Q9UBC9 169 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 B3GALT5-AS1P59052 145 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 PLAC9Q5JTB6 97 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 DNM1P46Q6ZS02 220 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 RTN4RL2Q86UN3 420 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 C9orf106Q8NAJ2 232 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 NABP1Q96AH0 204 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 CYYR1Q96J86 154 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 PRUNE2Q8WUY3 3088 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 H7BYZ3 331 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 SPINK4O60575 86 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 S100A8P05109 93 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 UBE2G2P60604 165 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 HTD2P86397 168 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 TLE4Q04727 773 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 AESQ08117 197 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 TCF15Q12870 199 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 Q3ZCU0 254 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 SLC35G3Q8N808 338 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 BCL2L2Q92843 193 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 C1QTNF5Q9BXJ0 243 aa9.93□□□□□ -0.82
TRAPPC9-202ENST00000438773 NDUFB3O43676 98 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 CA11O75493 328 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 MMP7P09237 267 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 IL3RAP26951 378 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 PMELP40967 661 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 CCL8P80075 99 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 KIAA2026Q5HYC2 2103 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 ETV3LQ6ZN32 361 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 CALHM1Q8IU99 346 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 TPRX1Q8N7U7 411 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 LHX4Q969G2 390 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 MRPL24Q96A35 216 aaKnown RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 LYZL4Q96KX0 146 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 AURKAIP1Q9NWT8 199 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 GPR132Q9UNW8 380 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGKV3D-15A0A087WSY6 115 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 PPP5D1E7EU14 171 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 ETV2O00321 342 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMEM50BP56557 158 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 HLA-DRB3P79483 266 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 IL13RA2Q14627 380 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 RNF212Q495C1 297 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 PRSS54Q6PEW0 395 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 LIAT1Q6ZQX7 453 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 BAGE3Q86Y29 109 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 TNFSF18Q9UNG2 199 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 MED13Q9UHV7 2174 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGHV1-2P23083 117 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 LRRC10Q5BKY1 277 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 OR8G5Q8NG78 346 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 FAM103A1Q9BTL3 118 aaKnown RBP9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 PROK2Q9HC23 129 aa9.92□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 SCTP09683 121 aa9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 MUC1P15941 1255 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 HFEQ30201 348 aa9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 ACSF3Q4G176 576 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 LYG1Q8N1E2 194 aa9.91□□□□□ -0.82
TRAPPC9-202ENST00000438773 MDS2Q8NDY4 140 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms