RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ATRQ13535 2644 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 CCDC160A6NGH7 325 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 J3QR06 171 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 SLC31A2O15432 143 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 GSTP1P09211 210 aaKnown RBP13.07□□□□□ -0.32
SNRPB-202ENST00000438552 HTR1DP28221 377 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
SNRPB-202ENST00000438552 IER3P46695 156 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 PRRX1P54821 245 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 ARL6IP1Q15041 203 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 SSX2Q16385 188 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 KRTAP24-1Q3LI83 254 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 DYNC2LI1Q8TCX1 351 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 SSMEM1Q8WWF3 244 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 ACOT12Q8WYK0 555 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 OR2S2Q9NQN1 319 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
SNRPB-202ENST00000438552 JPT1Q9UK76 154 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
SNRPB-202ENST00000438552 A0A0A6YYH2 397 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 A6NJ64 397 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 BUB1B-PAK6H3BSN5 160 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 HPGDSO60760 199 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 SCTP09683 121 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
SNRPB-202ENST00000438552 TALDO1P37837 337 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 GNG2P59768 71 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 AP3S1Q92572 193 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 GALMQ96C23 342 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 MALSU1Q96EH3 234 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
SNRPB-202ENST00000438552 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
SNRPB-202ENST00000438552 H3BUX3 64 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 TRIM77I1YAP6 450 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 SSX5O60225 188 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 RNASE1P07998 156 aaKnown RBP13.05□□□□□ -0.32
SNRPB-202ENST00000438552 PTHLHP12272 177 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 SOX6P35712 828 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 HTD2P86397 168 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 TPTE2P1Q5T6R2 138 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 MZT2AQ6P582 158 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 OR10X1Q8NGY0 326 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
SNRPB-202ENST00000438552 SSX3Q99909 188 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 CHIAQ9BZP6 476 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 MEGF9Q9H1U4 602 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
SNRPB-202ENST00000438552 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 DPM3Q9P2X0 92 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 SLC23A1Q9UHI7 598 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 POMT1Q9Y6A1 747 aa13.05□□□□□ -0.32
SNRPB-202ENST00000438552 IGKV1-6A0A0C4DH72 117 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 BTBD17A6NE02 478 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 LEUTXA8MZ59 168 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 LY6LH3BQJ8 138 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 CLDN34H7C241 214 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 XRCC3O43542 346 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 APOA1P02647 267 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 ELK1P19419 428 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 DTYMKP23919 212 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 CEACAM3P40198 252 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 TAS2R20P59543 309 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 MADCAM1Q13477 382 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 HERPUD1Q15011 391 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 MORN2Q502X0 79 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 STEAP3Q658P3 488 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 SLC25A48Q6ZT89 311 aaKnown RBP13.04□□□□□ -0.32
SNRPB-202ENST00000438552 TMEM86BQ8N661 226 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
SNRPB-202ENST00000438552 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
SNRPB-202ENST00000438552 TOMM40LQ969M1 308 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 PARP12Q9H0J9 701 aaKnown RBP13.04□□□□□ -0.32
SNRPB-202ENST00000438552 DPAGT1Q9H3H5 408 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 AUNIPQ9H7T9 357 aa13.04□□□□□ -0.32
SNRPB-202ENST00000438552 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 FABP7O15540 132 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 KIR2DS4P43632 304 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 RAB13P51153 203 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 ZNF134P52741 427 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 PITPNAQ00169 270 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 DIAPH2-AS1Q14236 149 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 KIR2DS1Q14954 304 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 LY6EQ16553 131 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 Q3ZCU0 254 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 CT45A1Q5HYN5 189 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 C8orf31Q8N9H6 132 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 CT45A3Q8NHU0 189 aa13.03□□□□□ -0.32
SNRPB-202ENST00000438552 RPEQ96AT9 228 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms