RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NDUFB7P17568 137 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 SIGLECL1Q8N7X8 197 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 KDF1Q8NAX2 398 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ZBTB34Q8NCN2 500 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 PHF3Q92576 2039 aaKnown RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 IL22RA2Q969J5 263 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 PRDM14Q9GZV8 571 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 RNF122Q9H9V4 155 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 GVINP1Q7Z2Y8 2422 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 COL4A6Q14031 1691 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 IGSF23A1L1A6 192 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 GATCO43716 136 aaKnown RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 PAGE4O60829 102 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 LYZL6O75951 148 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 BMP5P22003 454 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 CTSSP25774 331 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 LTBRP36941 435 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 CDX1P47902 265 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 TPPP2P59282 170 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 C3AR1Q16581 482 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF818PQ6ZRF7 136 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF439Q8NDP4 499 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 MS4A10Q96PG2 267 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 TUBA4BQ9H853 241 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 PROCRQ9UNN8 238 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 DNAJC13O75165 2243 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ZNHIT1O43257 154 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 SYNGR1O43759 233 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 EFNA2O43921 213 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 HAND1O96004 215 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 COX6A1P12074 109 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 MDKP21741 143 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ERVFC1-1P60608 527 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 HIKESHIQ53FT3 197 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 PHYHD1Q5SRE7 291 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 BTNL3Q6UXE8 466 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 DNM1P46Q6ZS02 220 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 SAXO1Q8IYX7 474 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 OR2M7Q8NG81 312 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 MESP1Q9BRJ9 268 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 ARRDC1-AS1Q9H2J1 176 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 AKIRIN1Q9H9L7 192 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-205ENST00000438362 SPTA1P02549 2419 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 IGKV1D-8A0A087WSZ0 117 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 hCG_38984A0A1B0GV85 526 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 OOEPA6NGQ2 149 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 NKX6-3A6NJ46 265 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DVL1O14640 695 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SYNGR3O43761 229 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 NTF3P20783 257 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 G6PCP35575 357 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 PKIAP61925 76 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 RPS23P62266 143 aaKnown RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 MEF2BQ02080 365 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DMWDQ09019 674 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 RTL8BQ17RB0 113 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF766Q5HY98 468 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 TRAT1Q6PIZ9 186 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 FADS6Q8N9I5 356 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SAP25Q8TEE9 199 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF837Q96EG3 531 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 LYZL4Q96KX0 146 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 GPR61Q9BZJ8 451 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 COMMD5Q9GZQ3 224 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 TINAGQ9UJW2 476 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 IGLV3-32A0A0A0MS00 114 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 TGIF2-C20orf24A0A0A6YYL0 155 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DBX1A6NMT0 343 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 PATE3B3GLJ2 98 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 ENSAO43768 121 aaKnown RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SOX15O60248 233 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 QRFPP83859 136 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 CPEB3Q8NE35 698 aaKnown RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 OR8G5Q8NG78 346 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 OR2Z1Q8NG97 314 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 R3HDM4Q96D70 268 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 IER2Q9BTL4 223 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DYNLRB1Q9NP97 96 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DLL3Q9NYJ7 618 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 FUT9Q9Y231 359 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 DENND4CQ5VZ89 1909 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 C20orf202A1L168 122 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 ZIC3O60481 467 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 CD5P06127 495 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 FBP1P09467 338 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 HOXA6P31267 233 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 CCKARP32238 428 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 GLIPR1P48060 266 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SUB1P53999 127 aaKnown RBP eCLIP5.75□□□□□ -1.497e-7■■■■□ 21.6
CSDE1-205ENST00000438362 HIST1H3AP68431 136 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 CFHR1Q03591 330 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 IZUMO4Q1ZYL8 232 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF506Q5JVG8 444 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 H1FXQ92522 213 aaKnown RBP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 TAF15Q92804 592 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSDE1-205ENST00000438362 OR4C12Q96R67 309 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 P2RX4Q99571 388 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 CXXC4Q9H2H0 198 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SMOC1Q9H4F8 434 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms