RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 AADACP22760 399 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 DLX6P56179 175 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 LOXL3P58215 753 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 HEPN1Q6WQI6 88 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 OR52M1Q8NGK5 317 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 CREB3L1Q96BA8 519 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 UPRTQ96BW1 309 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 MOB3AQ96BX8 217 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 DMRTB1Q96MA1 342 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 RDH8Q9NYR8 311 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 OR2W1Q9Y3N9 320 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 ARHGAP32A7KAX9 2087 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 FOXH1O75593 365 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 HERV-K104P61576 105 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 LTC4SQ16873 150 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 ZDHHC22Q8N966 263 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 MARVELD1Q9BSK0 173 aa18.93■□□□□ 0.62
CPSF4-204ENST00000436336 TRAV6A0A075B6T7 132 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 IGHV3-43A0A0B4J1X8 118 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 FAM172BPA6NC97 362 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 YPEL1O60688 119 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 IGHV3-43DP0DP04 118 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 USF1P22415 310 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-204ENST00000436336 ZFP36P26651 326 aaKnown RBP18.92■□□□□ 0.62
CPSF4-204ENST00000436336 GNMTQ14749 295 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 SURF2Q15527 256 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-204ENST00000436336 MARCH1Q8TCQ1 289 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 SCGB3A2Q96PL1 93 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 YPEL2Q96QA6 119 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 FXYD6Q9H0Q3 95 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 GFOD1Q9NXC2 390 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 GNG12Q9UBI6 72 aa18.92■□□□□ 0.62
CPSF4-204ENST00000436336 C17orf98A8MV24 154 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 H2AFB2P0C5Z0 115 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 FXYD4P59646 89 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 PRAMEF5Q5TYX0 476 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 UNC79Q9P2D8 2635 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 ARPC1BO15143 372 aaKnown RBP18.91■□□□□ 0.62
CPSF4-204ENST00000436336 RGS11O94810 467 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 RBP4P02753 201 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 PPP1CCP36873 323 aaKnown RBP18.91■□□□□ 0.62
CPSF4-204ENST00000436336 UCP3P55916 312 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 MORN2Q502X0 79 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 Q6ZNX1 250 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 OR10V1Q8NGI7 309 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 GPR132Q9UNW8 380 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 FLVCR2Q9UPI3 526 aa18.91■□□□□ 0.62
CPSF4-204ENST00000436336 POLR3KQ9Y2Y1 108 aaPredicted RBP18.91■□□□□ 0.62
CPSF4-204ENST00000436336 NAV2Q8IVL1 2488 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 FAM157AC9JC47 383 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 INMT-MINDY4F8WBC2 141 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 ENSAO43768 121 aaKnown RBP18.9■□□□□ 0.62
CPSF4-204ENST00000436336 MMP23AO75900 390 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 RAG2P55895 527 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 LCN2P80188 198 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 C11orf42Q8N5U0 333 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 TOMM40LQ969M1 308 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 VSIG4Q9Y279 399 aa18.9■□□□□ 0.62
CPSF4-204ENST00000436336 NFYBP25208 207 aa18.89■□□□□ 0.61
CPSF4-204ENST00000436336 LY6G6FQ5SQ64 297 aa18.89■□□□□ 0.61
CPSF4-204ENST00000436336 FAM53AQ6NSI3 398 aaPredicted RBP18.89■□□□□ 0.61
CPSF4-204ENST00000436336 KRTAP1-3Q8IUG1 177 aa18.89■□□□□ 0.61
CPSF4-204ENST00000436336 EDARADDQ8WWZ3 215 aa18.89■□□□□ 0.61
CPSF4-204ENST00000436336 DACT3Q96B18 629 aaPredicted RBP18.89■□□□□ 0.61
CPSF4-204ENST00000436336 A0A096LNT2 108 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 hCG_1809904A0A1W2PP81 198 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 A0A1W2PPE2 198 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 A0A1W2PR64 198 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 A0A1W2PRV1 198 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 RLN1P04808 185 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 PGAM2P15259 253 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 LUMP51884 338 aaPredicted RBP18.88■□□□□ 0.61
CPSF4-204ENST00000436336 PAX2Q02962 417 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 LPCAT3Q6P1A2 487 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 ZFAND1Q8TCF1 268 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 FAM216AQ8WUB2 273 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 PARP12Q9H0J9 701 aaKnown RBP18.88■□□□□ 0.61
CPSF4-204ENST00000436336 ABCA2Q9BZC7 2435 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 IGKV1D-13A0A0B4J2D9 117 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 IGHV2-70DA0A0C4DH43 119 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 PEX14O75381 377 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 IGHV1-8P0DP01 117 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 IGKV1-13P0DP09 117 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 MECP2P51608 486 aaKnown RBP18.88■□□□□ 0.61
CPSF4-204ENST00000436336 ERVFRD-1P60508 538 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 BAMBIQ13145 260 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 SLC38A6Q8IZM9 456 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 ONECUT1Q9UBC0 465 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 RBM7Q9Y580 266 aaKnown RBP18.88■□□□□ 0.61
CPSF4-204ENST00000436336 HECTD1Q9ULT8 2610 aa18.88■□□□□ 0.61
CPSF4-204ENST00000436336 M0R1W7 72 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 ITGB1BP1O14713 200 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 DHFRP00374 187 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 LOXL1Q08397 574 aaPredicted RBP18.87■□□□□ 0.61
CPSF4-204ENST00000436336 Q3ZCU0 254 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 KIR3DL3Q8N743 410 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 SECTM1Q8WVN6 248 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 FOXC2Q99958 501 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 SLC5A7Q9GZV3 580 aa18.87■□□□□ 0.61
CPSF4-204ENST00000436336 C5orf66Q9H5L9 145 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms