RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TP53RKQ96S44 253 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 AIFM2Q9BRQ8 373 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 HES7Q9BYE0 225 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZC4H2Q9NQZ6 224 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 LYRM2Q9NU23 88 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF581Q9P0T4 197 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 IL17BQ9UHF5 180 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 RCL1Q9Y2P8 373 aaKnown RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 OR2W1Q9Y3N9 320 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 WIPI2Q9Y4P8 454 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 LSM5Q9Y4Y9 91 aaKnown RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 MMP24Q9Y5R2 645 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 DNAJC13O75165 2243 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 FAM90A26D6RGX4 464 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 F8W036 122 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 RNASEK-C17orf49H0YIS7 233 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 K7N7A8 449 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 HSPA12AO43301 675 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SMPD2O60906 423 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 NDUFS6O75380 124 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 MED6O75586 246 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SCAF4O95104 1147 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 NGFP01138 241 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 IGHV3-9P01782 118 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 PGA5P0DJD9 388 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 CBR1P16152 277 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 F2RP25116 425 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 FOXG1P55316 489 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 TAS2R30P59541 319 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 DEFA5Q01523 94 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 EWSR1Q01844 656 aaKnown RBP eCLIP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 PEA15Q15121 130 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 GUCA2BQ16661 112 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 EIF2S3LQ2VIR3 472 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SP6Q3SY56 376 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 PHLDA2Q53GA4 152 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 IGSF11Q5DX21 431 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF324BQ6AW86 544 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 Q6P435 159 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 HAGHLQ6PII5 290 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 FIP1L1Q6UN15 594 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 LINC00696Q6ZRV3 163 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 Q6ZT83 130 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 MDP1Q86V88 176 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF695Q8IW36 515 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 FAM219AQ8IW50 185 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SELENOHQ8IZQ5 122 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SUMF2Q8NBJ7 301 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 NARS2Q96I59 477 aaKnown RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 PBDC1Q9BVG4 233 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 PARD6GQ9BYG4 376 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 TLNRD1Q9H1K6 362 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 TUBA4BQ9H853 241 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 HES4Q9HCC6 221 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 OR2S2Q9NQN1 319 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SPRR3Q9UBC9 169 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 DUSP13Q9UII6 198 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 UBE2J1Q9Y385 318 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF407Q9C0G0 2248 aa6.3□□□□□ -1.4
COL17A1-204ENST00000433822 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TRAV24A0A0B4J272 114 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TRAV17A0A0B4J275 112 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 IGKV1-6A0A0C4DH72 117 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 RNF212BA8MTL3 300 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 J3QKU1 62 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SH2D1BO14796 132 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TSPAN4O14817 238 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SYNGR1O43759 233 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PGLYRP1O75594 196 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 DFFBO76075 338 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 IGKV3-15P01624 115 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SCTP09683 121 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 OR8U8P0C7N1 319 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 FOLR2P14207 255 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 MUC1P15941 1255 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PRKACAP17612 351 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SNCAP37840 140 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PPP1CBP62140 327 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ARG2P78540 354 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 MZT1Q08AG7 82 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 SP5Q6BEB4 398 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF497Q6ZNH5 498 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF818PQ6ZRF7 136 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 Q6ZRG5 221 aa6.29□□□□□ -1.4
COL17A1-204ENST00000433822 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.29□□□□□ -1.4
COL17A1-204ENST00000433822 TMEM252Q8N6L7 170 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms