RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 ZNF600Q6ZNG1 722 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 ABHD5Q8WTS1 349 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 RIMS4Q9H426 269 aaPredicted RBP12.8□□□□□ -0.36
LINC00839-202ENST00000429940 VSIRQ9H7M9 311 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 PARD6AQ9NPB6 346 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
LINC00839-202ENST00000429940 CNOT1A5YKK6 2376 aaKnown RBP12.8□□□□□ -0.36
LINC00839-202ENST00000429940 PIGBOS1A0A0B4J2F0 54 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 HS3ST1O14792 307 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 SYNGR1O43759 233 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 CD59P13987 128 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 RND2P52198 227 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 ARF1P84077 181 aaKnown RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 ZNF324BQ6AW86 544 aaPredicted RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 PSMF1Q92530 271 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 PRDM13Q9H4Q3 707 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 ERRFI1Q9UJM3 462 aaPredicted RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 MRPL33O75394 65 aaKnown RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 IAPPP10997 89 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
LINC00839-202ENST00000429940 GDF1P27539 372 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 NRN1LQ496H8 165 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 Q6ZRM9 215 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 LRFN1Q9P244 771 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
LINC00839-202ENST00000429940 METTL15P1P0C7V9 234 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 FABP4P15090 132 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
LINC00839-202ENST00000429940 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 DBX2Q6ZNG2 339 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 SSX7Q7RTT5 188 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 MBD3L1Q8WWY6 194 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 RDH5Q92781 318 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 TMEM45BQ96B21 275 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 ZNF488Q96MN9 340 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 HIST1H2AAQ96QV6 131 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 ZNF552Q9H707 407 aaPredicted RBP12.78□□□□□ -0.36
LINC00839-202ENST00000429940 SDF2L1Q9HCN8 221 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 PSENENQ9NZ42 101 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
LINC00839-202ENST00000429940 TGOLN2O43493 480 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 SYNGR2O43760 224 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 LY86O95711 162 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 ZNF525Q8N782 197 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 CA5BP1Q8WTZ4 195 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
LINC00839-202ENST00000429940 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
LINC00839-202ENST00000429940 DEPPQ9NTK1 212 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 RNF150Q9ULK6 438 aa12.78□□□□□ -0.36
LINC00839-202ENST00000429940 SPINK2P20155 84 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 ZFP36L1Q07352 338 aaKnown RBP12.77□□□□□ -0.36
LINC00839-202ENST00000429940 ARL16Q0P5N6 197 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 LINC00596Q86U02 117 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 OR5A2Q8NGI9 324 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.36
LINC00839-202ENST00000429940 RCC1LQ96I51 464 aaKnown RBP12.77□□□□□ -0.36
LINC00839-202ENST00000429940 P2RX4Q99571 388 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 PLK3Q9H4B4 646 aa12.77□□□□□ -0.36
LINC00839-202ENST00000429940 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 IGKV1-39P01597 117 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 IGKV1D-39P04432 117 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 OTX2P32243 289 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 Q0VFX4 171 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 LILRB2Q8N423 598 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 SSX3Q99909 188 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 PRRG4Q9BZD6 226 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 OR1A1Q9P1Q5 309 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 VAX2Q9UIW0 290 aa12.77□□□□□ -0.37
LINC00839-202ENST00000429940 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 ZFHX4Q86UP3 3567 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 TRBV6-6A0A0A6YYG2 114 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 TRAV24A0A0B4J272 114 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 PINLYPA6NC86 204 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 OPN1MWP04001 364 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 OPN1MW2P0DN77 364 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 OPN1MW3P0DN78 364 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
LINC00839-202ENST00000429940 GFRA1P56159 465 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 HBG1P69891 147 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 HBG2P69892 147 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 GAMTQ14353 236 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 LSM10Q969L4 123 aaKnown RBP12.76□□□□□ -0.37
LINC00839-202ENST00000429940 RHOVQ96L33 236 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
LINC00839-202ENST00000429940 NGFP01138 241 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms