RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LALBAP00709 142 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
MSH5-208ENST00000429846 ZNF134P52741 427 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 RPS11P62280 158 aaKnown RBP eCLIP11.65□□□□□ -0.54
MSH5-208ENST00000429846 LSAMPQ13449 338 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 MMDQ15546 238 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 CT45A1Q5HYN5 189 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 AWAT2Q6E213 333 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
MSH5-208ENST00000429846 PRR18Q8N4B5 295 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 NKAIN3Q8N8D7 197 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 SETD9Q8NE22 299 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 OR4K15Q8NH41 348 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 CT45A3Q8NHU0 189 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 MUL1Q969V5 352 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 ZNF107Q9UII5 783 aaPredicted RBP11.65□□□□□ -0.54
MSH5-208ENST00000429846 LSM4Q9Y4Z0 139 aaKnown RBP11.65□□□□□ -0.54
MSH5-208ENST00000429846 PEX16Q9Y5Y5 336 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 SEC14L6B5MCN3 397 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 MGMTP16455 207 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 FUT3P21217 361 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 VHLP40337 213 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 INSL3P51460 131 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 F2RL1P55085 397 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 ZNF485Q8NCK3 441 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 OR10V1Q8NGI7 309 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 OR1L1Q8NH94 360 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 UBE2E2Q96LR5 201 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 Q96M66 194 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 KCTD7Q96MP8 289 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 OR14A2Q96R54 314 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 ABHD14AQ9BUJ0 271 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 OR2S2Q9NQN1 319 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 MBNL3Q9NUK0 354 aaKnown RBP11.64□□□□□ -0.55
MSH5-208ENST00000429846 KCNIP1Q9NZI2 227 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
MSH5-208ENST00000429846 OR8U8P0C7N1 319 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
MSH5-208ENST00000429846 MAPK3P27361 379 aaPredicted RBP11.63□□□□□ -0.55
MSH5-208ENST00000429846 CAPGP40121 348 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 HTD2P86397 168 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 DOC2BQ14184 412 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 MORN2Q502X0 79 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 TTC23Q5W5X9 447 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 OR11H1Q8NG94 326 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 UQCC2Q9BRT2 126 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 SELENOIQ9C0D9 397 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 TAF9BQ9HBM6 251 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 GHRLQ9UBU3 117 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 CLEC2DQ9UHP7 191 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 U3KQK5 164 aa11.63□□□□□ -0.55
MSH5-208ENST00000429846 PDCD6O75340 191 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 CRTAPO75718 401 aaPredicted RBP11.62□□□□□ -0.55
MSH5-208ENST00000429846 RGS11O94810 467 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 HLA-DRB1P01911 266 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 MAS1P04201 325 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 CD1AP06126 327 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 SLC2A2P11168 524 aaPredicted RBP11.62□□□□□ -0.55
MSH5-208ENST00000429846 PPIFP30405 207 aaKnown RBP11.62□□□□□ -0.55
MSH5-208ENST00000429846 ECI1P42126 302 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 ACTBP60709 375 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 RUNX1Q01196 453 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 LY6G6FQ5SQ64 297 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 TMEM65Q6PI78 240 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 LYPD6Q86Y78 171 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 ZFP41Q8N8Y5 198 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 DERL3Q96Q80 235 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 PRR25Q96S07 402 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 ZNF251Q9BRH9 671 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 CST11Q9H112 138 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 BANF2Q9H503 90 aa11.62□□□□□ -0.55
MSH5-208ENST00000429846 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
MSH5-208ENST00000429846 NBR2O15453 112 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 YPEL1O60688 119 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 MYF6P23409 242 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 ADARB1P78563 741 aaKnown RBP11.61□□□□□ -0.55
MSH5-208ENST00000429846 ZNF616Q08AN1 781 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 ST3GAL4Q11206 333 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 ZNF260Q3ZCT1 412 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 SIGIRRQ6IA17 410 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 FAM71F2Q6NXP2 309 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 ODF3L1Q8IXM7 274 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 CYGBQ8WWM9 190 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 YPEL2Q96QA6 119 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 OR51J1Q9H342 316 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 CNOT2Q9NZN8 540 aaKnown RBP11.61□□□□□ -0.55
MSH5-208ENST00000429846 SCOCQ9UIL1 159 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 VSIG4Q9Y279 399 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 LRRC42Q9Y546 428 aa11.61□□□□□ -0.55
MSH5-208ENST00000429846 DNAH9Q9NYC9 4486 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 UBE2QL1A1L167 161 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 EFCAB10A6NFE3 127 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 I3L521 148 aa11.6□□□□□ -0.55
MSH5-208ENST00000429846 MYL12BO14950 172 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms