RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TMEM187Q14656 261 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 LYPD6Q86Y78 171 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 ZNF561Q8N587 486 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 OR1J1Q8NGS3 322 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 OR10J5Q8NHC4 309 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 SAP25Q8TEE9 199 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 HIST1H2BAQ96A08 127 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 GPR35Q9HC97 309 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 OBP2BQ9NPH6 170 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 B4GALT7Q9UBV7 327 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 KALRNO60229 2985 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 IGLV3-12A0A075B6K2 115 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 A0A1W2PPE3 182 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 UMODP07911 640 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 FKBP2P26885 142 aaKnown RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 EIF2S3P41091 472 aaKnown RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 P2RY1P47900 373 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 IDH3GP51553 393 aaPredicted RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 CCL20P78556 96 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 FAM3AP98173 230 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 ZDHHC23Q8IYP9 409 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 GTF3AQ92664 365 aaKnown RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 SMIM8Q96KF7 97 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 BOKQ9UMX3 212 aaPredicted RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
HPS4-205ENST00000429411 PKDREJQ9NTG1 2253 aa6.94□□□□□ -1.3
HPS4-205ENST00000429411 TCAPO15273 167 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 KLK10O43240 276 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 MT-ND4LP03901 98 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 RAB5AP20339 215 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 CFPP27918 469 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 RBM11P57052 281 aaKnown RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 CLN3Q13286 438 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 HIST2H3PS2Q5TEC6 136 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 GCNT2Q8N0V5 402 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 FAM89BQ8N5H3 189 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 CNEP1R1Q8N9A8 125 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ZIC4Q8N9L1 334 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 WFDC12Q8WWY7 111 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 NABP1Q96AH0 204 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 APH1AQ96BI3 265 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 PFDN5Q99471 154 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ABI3Q9P2A4 366 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 CACFD1Q9UGQ2 172 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TMED3Q9Y3Q3 217 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TMEM131Q92545 1883 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 SMG1Q96Q15 3661 aaKnown RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 DEGS1O15121 323 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TNFSF15O95150 251 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 NTF4P34130 210 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 SNCAP37840 140 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ALDH3B1P43353 468 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 SELENOVP59797 346 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 NKX6-1P78426 367 aaPredicted RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 ARG2P78540 354 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ADIRFQ15847 76 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 PLA2G2CQ5R387 149 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ANGPTL4Q9BY76 406 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TMEM140Q9NV12 185 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 MIOXQ9UGB7 285 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 V9GYS6 101 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TRBV6-7A0A0A0MS04 114 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TOX3O15405 576 aaPredicted RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 NXPH2O95156 264 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 KRASP01116 189 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 SRD5A2P31213 254 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 MAGEA5P43359 124 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 IL11RAQ14626 422 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 HMGN3Q15651 99 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 C9orf152Q5JTZ5 239 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 TMEM252Q8N6L7 170 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 CYB561D1Q8N8Q1 229 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 RPUSD4Q96CM3 377 aaKnown RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 RBMXL1Q96E39 390 aaKnown RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 HS3ST6Q96QI5 342 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 PLEKHF2Q9H8W4 249 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 LOXL2Q9Y4K0 774 aa6.93□□□□□ -1.3
HPS4-205ENST00000429411 HELZ2Q9BYK8 2649 aaKnown RBP6.93□□□□□ -1.3
HPS4-205ENST00000429411 IGSF23A1L1A6 192 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 RBFOX3A6NFN3 312 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 SRSF4Q08170 494 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 ZNF239Q16600 458 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 BTNL8Q6UX41 500 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 UBAC2Q8NBM4 344 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 RFESDQ8TAC1 157 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 TMEM100Q9NV29 134 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 FBLN5Q9UBX5 448 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 FZR1Q9UM11 496 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 IGKV1D-13A0A0B4J2D9 117 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 H3BQ15 152 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 SYNGR3O43761 229 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms