RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 LOXL4Q96JB6 756 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 PACRGQ96M98 296 aaPredicted RBP12.8□□□□□ -0.36
CACTIN-203ENST00000429344 C21orf140B9A014 251 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 TUSC5Q8IXB3 177 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 LAMP3Q9UQV4 416 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 PIEZO2Q9H5I5 2752 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 LRRC3CA6NJW4 275 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 WDR1O75083 606 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 PCBD1P61457 104 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 SLC10A1Q14973 349 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 DOCK10Q96BY6 2186 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 NBEAQ8NFP9 2946 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 PAX6P26367 422 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 ARF1P84077 181 aaKnown RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 APH1AQ96BI3 265 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 ERRFI1Q9UJM3 462 aaPredicted RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 SEC14L6B5MCN3 397 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 RBM11P57052 281 aaKnown RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 TMEM37Q8WXS4 190 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 GNPNAT1Q96EK6 184 aaPredicted RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 TTTY12Q9BZ98 90 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 RPRMQ9NS64 109 aa12.79□□□□□ -0.36
CACTIN-203ENST00000429344 KLF13Q9Y2Y9 288 aaPredicted RBP12.79□□□□□ -0.36
CACTIN-203ENST00000429344 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 ETV2O00321 342 aaPredicted RBP12.78□□□□□ -0.36
CACTIN-203ENST00000429344 DKK1O94907 266 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 RAB35Q15286 201 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 TMEM251Q8N6I4 163 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 RBMXL1Q96E39 390 aaKnown RBP12.78□□□□□ -0.36
CACTIN-203ENST00000429344 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
CACTIN-203ENST00000429344 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 C5orf49A4QMS7 147 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 PITX3O75364 302 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 H3F3AP84243 136 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 HIST1H2AAQ96QV6 131 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
CACTIN-203ENST00000429344 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 CACNG5Q9UF02 275 aa12.78□□□□□ -0.36
CACTIN-203ENST00000429344 FOXD3Q9UJU5 478 aaPredicted RBP12.78□□□□□ -0.36
CACTIN-203ENST00000429344 PSG2P11465 335 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 S100GP29377 79 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 FUT6P51993 359 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 PMP22Q01453 160 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 CLN3Q13286 438 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 MRPL21Q7Z2W9 205 aaKnown RBP12.77□□□□□ -0.36
CACTIN-203ENST00000429344 CNEP1R1Q8N9A8 125 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 ZIC4Q8N9L1 334 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 PSMF1Q92530 271 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 SMIM7Q9BQ49 75 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 TMEM38BQ9NVV0 291 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 MED13LQ71F56 2210 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 NTF4P34130 210 aa12.77□□□□□ -0.36
CACTIN-203ENST00000429344 ZNF732B4DXR9 585 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 TRAPPC2LH3BP13 241 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 NKX2-8O15522 239 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 TUSC2O75896 110 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 CDS2O95674 445 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 MMP7P09237 267 aaPredicted RBP12.77□□□□□ -0.37
CACTIN-203ENST00000429344 HIST3H3Q16695 136 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 FAM27BQ5VT28 67 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 Q6ZPA2 131 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 GCNT2Q8N0V5 402 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.37
CACTIN-203ENST00000429344 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 HBE1P02100 147 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 CD55P08174 381 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF25P17030 456 aaPredicted RBP12.76□□□□□ -0.37
CACTIN-203ENST00000429344 KCNMB1Q16558 191 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 DMRTC2Q8IXT2 367 aaPredicted RBP12.76□□□□□ -0.37
CACTIN-203ENST00000429344 RNF138Q8WVD3 245 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 CLDN34H7C241 214 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 NEURL1O76050 574 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 IFNA10P01566 189 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 SRPXP78539 464 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 RTP5Q14D33 572 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 CLDND2Q8NHS1 167 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 LHX4Q969G2 390 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 DEFA4P12838 97 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 VDAC1P21796 283 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 GLIPR1P48060 266 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 ABHD5Q8WTS1 349 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
CACTIN-203ENST00000429344 MKXQ8IYA7 352 aa12.75□□□□□ -0.37
CACTIN-203ENST00000429344 ATP5SQ99766 215 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms