RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ABHD3Q8WU67 409 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 ANGPTL4Q9BY76 406 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 SPAG17Q6Q759 2223 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 IGKV3D-15A0A087WSY6 115 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM189A5PLL7 270 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 CDRT15L2A8MXV6 281 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 B4E171 279 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 FFAR1O14842 300 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 GEMIN2O14893 280 aaKnown RBP7.82□□□□□ -1.16
CTNND1-208ENST00000428599 IGKV3-15P01624 115 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 CCL3P10147 92 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 MC5RP33032 325 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 TSPAN7P41732 249 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 ERVS71-1P61550 626 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 ISXQ2M1V0 245 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 CISD1Q9NZ45 108 aaKnown RBP7.82□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 LIFP15018 202 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 TSPOP30536 169 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 ZNF137PP52743 207 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 B2MP61769 119 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 OR2T10Q8NGZ9 312 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
CTNND1-208ENST00000428599 CEP290O15078 2479 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 SMAD7O15105 426 aaKnown RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PNLIPP16233 465 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 UNQ5815/PRO19632Q6UWF5 114 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 OR10D4PQ8NGN7 298 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 RBFOX3A6NFN3 312 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 APCSP02743 223 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PGA4P0DJD7 388 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PGA5P0DJD9 388 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PRDX2P32119 198 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 WNT5AP41221 380 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 RPL27AP46776 148 aaKnown RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 EIF4EBP2Q13542 120 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 P2RY6Q15077 328 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 CENPVQ7Z7K6 275 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 ADAMTS17Q8TE56 1095 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 SCNM1Q9BWG6 230 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 OR2W1Q9Y3N9 320 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 MYO16Q9Y6X6 1858 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM218A2RU14 115 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 MPC2O95563 127 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 FCARP24071 287 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 CCL8P80075 99 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PCSK4Q6UW60 755 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 OR2D3Q8NGH3 330 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 EAF1Q96JC9 268 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 PAXXQ9BUH6 204 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 METTL1Q9UBP6 276 aaKnown RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 LEUTXA8MZ59 168 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 AESQ08117 197 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 CXorf66Q5JRM2 361 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-208ENST00000428599 CLRN3Q8NCR9 226 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 ZNF519Q8TB69 540 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
CTNND1-208ENST00000428599 AHRRA9YTQ3 701 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 S1PR2O95136 353 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 SPINK2P20155 84 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 PRSS12P56730 875 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 MARS2Q96GW9 593 aaKnown RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 OPN3Q9H1Y3 402 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM238LA0A1B0GVL6 79 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 A6NJY4 79 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 NDUFA2O43678 99 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 NUBP1P53384 320 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ATP5G2Q06055 141 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 TMEM255AQ5JRV8 349 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CBLN3Q6UW01 205 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 GCSAMQ8N6F7 178 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 OR4B1Q8NGF8 309 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 C12orf57Q99622 126 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CCL28Q9NRJ3 127 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CLDN14O95500 239 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 C1QAP02745 245 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 RPL29P47914 159 aaKnown RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 STARD6P59095 220 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CIRBPQ14011 172 aaKnown RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 SLC35E3Q7Z769 313 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 BPIFA4PQ86YQ2 179 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ZNF385DQ9H6B1 395 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 hCG_38984A0A1B0GV85 526 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 RPL36A-HNRNPH2H7BZ11 118 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 KCNAB3O43448 404 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 HPRT1P00492 218 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 RPS4XP62701 263 aaKnown RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 KLF9Q13886 244 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-208ENST00000428599 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ZG16BQ96DA0 208 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 SNX22Q96L94 193 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 CCL13Q99616 98 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 ZDHHC8Q9ULC8 765 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 SCN10AQ9Y5Y9 1956 aa7.8□□□□□ -1.16
CTNND1-208ENST00000428599 A0A1W2PPV9 198 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms