RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 IGHV2-70DA0A0C4DH43 119 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 M0R1W7 72 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 ENSAO43768 121 aaKnown RBP10.26□□□□□ -0.77
TRIM39-207ENST00000428404 LIPFP07098 398 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 SPNP16150 400 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 NFYAP23511 347 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-207ENST00000428404 OMGP23515 440 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 ZBTB25P24278 435 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 CEACAM6P40199 344 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 ERVFRD-1P60508 538 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 TSPAN5P62079 268 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 LCN2P80188 198 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 MORN2Q502X0 79 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 FAM53AQ6NSI3 398 aaPredicted RBP10.26□□□□□ -0.77
TRIM39-207ENST00000428404 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 TMEM17Q86X19 198 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 KIR3DL3Q8N743 410 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 CHPT1Q8WUD6 406 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 Q96MF0 132 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 TMPRSS13Q9BYE2 586 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 OR2S2Q9NQN1 319 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 MMP26Q9NRE1 261 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 SCP2D1Q9UJQ7 156 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 CSMD1Q96PZ7 3565 aa10.26□□□□□ -0.77
TRIM39-207ENST00000428404 A0A087X0M5 115 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 FAM240BA0A1B0GVZ2 78 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 A0A1B0GX30 115 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 OR5H14A6NHG9 310 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 RNF223E7ERA6 249 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 ITGB1BP1O14713 200 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 YPEL1O60688 119 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 NDUFB6O95139 128 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 AADACP22760 399 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 GNMTQ14749 295 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 UTF1Q5T230 341 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 PRAMEF5Q5TYX0 476 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 GLCCI1Q86VQ1 547 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 LDLRAD3Q86YD5 345 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 Q8N7P7 452 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 MOB3AQ96BX8 217 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 YPEL2Q96QA6 119 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 SLC25A21Q9BQT8 299 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-207ENST00000428404 GINS4Q9BRT9 223 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 ZNF2Q9BSG1 426 aaPredicted RBP10.25□□□□□ -0.77
TRIM39-207ENST00000428404 PARP12Q9H0J9 701 aaKnown RBP10.25□□□□□ -0.77
TRIM39-207ENST00000428404 DPAGT1Q9H3H5 408 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 RDH8Q9NYR8 311 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 COPZ2Q9P299 210 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 OR2W1Q9Y3N9 320 aa10.25□□□□□ -0.77
TRIM39-207ENST00000428404 IGHV3-43A0A0B4J1X8 118 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 HSPA12AO43301 675 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 PPYP01298 95 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 TCRBP04435 133 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 IGHV1-8P0DP01 117 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 IGHV3-43DP0DP04 118 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 PPP1CCP36873 323 aaKnown RBP10.24□□□□□ -0.77
TRIM39-207ENST00000428404 UCP3P55916 312 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 RBMS2Q15434 407 aaKnown RBP10.24□□□□□ -0.77
TRIM39-207ENST00000428404 Q3ZCU0 254 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 SCGB2B2Q4G0G5 96 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 MINDY2Q8NBR6 621 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 FAM216AQ8WUB2 273 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 AGMATQ9BSE5 352 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 UNKLQ9H9P5 680 aaKnown RBP10.24□□□□□ -0.77
TRIM39-207ENST00000428404 GNG12Q9UBI6 72 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 KPTNQ9Y664 436 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
TRIM39-207ENST00000428404 MYO9AB2RTY4 2548 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 IGKV1D-13A0A0B4J2D9 117 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 B4DSR2 109 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 MSMBP08118 114 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 IGKV1-13P0DP09 117 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 PRTN3P24158 256 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 CD34P28906 385 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 ZNF134P52741 427 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 ARF6P62330 175 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 PAX8Q06710 450 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 SURF2Q15527 256 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-207ENST00000428404 LTC4SQ16873 150 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 CCBE1Q6UXH8 406 aaPredicted RBP10.23□□□□□ -0.77
TRIM39-207ENST00000428404 CENPSQ8N2Z9 138 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 C8orf31Q8N9H6 132 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 OR10V1Q8NGI7 309 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 ZNF596Q8TC21 504 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 MARVELD1Q9BSK0 173 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 FXYD6Q9H0Q3 95 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 METTL8Q9H825 291 aaKnown RBP10.23□□□□□ -0.77
TRIM39-207ENST00000428404 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 GPR132Q9UNW8 380 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms