RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 ZNF580Q9UK33 172 aa16.38■□□□□ 0.21
UBXN4-204ENST00000426921 NUDT19A8MXV4 375 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 ZNF736B4DX44 427 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-204ENST00000426921 H0YHG0 523 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 MYL12BO14950 172 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 RCC1P18754 421 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-204ENST00000426921 FUT3P21217 361 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 MAPK3P27361 379 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-204ENST00000426921 HOXD3P31249 432 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-204ENST00000426921 CFHR3Q02985 330 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 RCN1Q15293 331 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 AHSA2Q719I0 299 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 OR1L1Q8NH94 360 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 DPF1Q92782 380 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 GHRLQ9UBU3 117 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 COL7A1Q02388 2944 aa16.37■□□□□ 0.21
UBXN4-204ENST00000426921 CASQ2O14958 399 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-204ENST00000426921 LANCL1O43813 399 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 PDCD6O75340 191 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 CRTAPO75718 401 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-204ENST00000426921 PNLIPRP3Q17RR3 467 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 C6orf141Q5SZD1 244 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 OGFRL1Q5TC84 451 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-204ENST00000426921 NANOGP1Q8N7R0 232 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 OR10V1Q8NGI7 309 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 TAF9BQ9HBM6 251 aa16.36■□□□□ 0.21
UBXN4-204ENST00000426921 LSAMPQ13449 338 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 FOXE3Q13461 319 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 PRR18Q8N4B5 295 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 RAX2Q96IS3 184 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 CYYR1Q96J86 154 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 RASL11BQ9BPW5 248 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 HSPB9Q9BQS6 159 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 JPT1Q9UK76 154 aa16.35■□□□□ 0.21
UBXN4-204ENST00000426921 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
UBXN4-204ENST00000426921 IGF1P05019 195 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 RPLP1P05386 114 aaKnown RBP16.34■□□□□ 0.21
UBXN4-204ENST00000426921 ELANEP08246 267 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 GPR50Q13585 617 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 MORN2Q502X0 79 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 RNLSQ5VYX0 342 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 MRPL30Q8TCC3 161 aaKnown RBP16.34■□□□□ 0.21
UBXN4-204ENST00000426921 TFAP2CQ92754 450 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 CST11Q9H112 138 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 OR2S2Q9NQN1 319 aa16.34■□□□□ 0.21
UBXN4-204ENST00000426921 UBE2QL1A1L167 161 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 IGHG4P01861 327 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 UBBP0CG47 229 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 SOX6P35712 828 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 CDX1P47902 265 aaPredicted RBP16.33■□□□□ 0.2
UBXN4-204ENST00000426921 F2RL1P55085 397 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 GP2P55259 537 aaKnown RBP16.33■□□□□ 0.2
UBXN4-204ENST00000426921 HTD2P86397 168 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 CXorf66Q5JRM2 361 aaPredicted RBP16.33■□□□□ 0.2
UBXN4-204ENST00000426921 LY6G6FQ5SQ64 297 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 UNQ9370/PRO34162Q6UXP9 181 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 BPIFB6Q8NFQ5 453 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 ABHD14AQ9BUJ0 271 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 DCLRE1BQ9H816 532 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 ERGIC3Q9Y282 383 aa16.33■□□□□ 0.2
UBXN4-204ENST00000426921 CCL24O00175 119 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 CHATP28329 748 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 GNMTQ14749 295 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 ODF3L1Q8IXM7 274 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 OR8U1Q8NH10 309 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 PHYHIPQ92561 330 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 FAM46BQ96A09 425 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
UBXN4-204ENST00000426921 YPEL1O60688 119 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 PSMB8P28062 276 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 INSL4Q14641 139 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 KIR2DS1Q14954 304 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 VAX1Q5SQQ9 334 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 C1orf100Q5SVJ3 147 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 LRRTM1Q86UE6 522 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 MS4A15Q8N5U1 240 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 MYOZ3Q8TDC0 251 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 DUX3Q96PT4 197 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 YPEL2Q96QA6 119 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 CHCHD6Q9BRQ6 235 aa16.31■□□□□ 0.2
UBXN4-204ENST00000426921 ZMAT5Q9UDW3 170 aaKnown RBP16.31■□□□□ 0.2
UBXN4-204ENST00000426921 CDK1P06493 297 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 OR5H8P0DN80 308 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 VSIG8P0DPA2 414 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 VDAC1P21796 283 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 PPP1CCP36873 323 aaKnown RBP16.3■□□□□ 0.2
UBXN4-204ENST00000426921 RPS27AP62979 156 aaKnown RBP16.3■□□□□ 0.2
UBXN4-204ENST00000426921 DCTN2Q13561 401 aaKnown RBP16.3■□□□□ 0.2
UBXN4-204ENST00000426921 MMDQ15546 238 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 HMGN3Q15651 99 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 ACSM3Q53FZ2 586 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 DEFB121Q5J5C9 76 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 FAM27D1Q5T7N8 215 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 LCNL1Q6ZST4 164 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 ZNF833PQ6ZTB9 187 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 OR52L2PQ8NGH6 319 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 RBMXL1Q96E39 390 aaKnown RBP16.3■□□□□ 0.2
UBXN4-204ENST00000426921 B9D2Q9BPU9 175 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 SULT4A1Q9BR01 284 aa16.3■□□□□ 0.2
UBXN4-204ENST00000426921 MND1Q9BWT6 205 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms