RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 OR14J1Q9UGF5 321 aa12.21□□□□□ -0.45
ERCC3-202ENST00000426778 H0Y980 276 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 IFNA5P01569 189 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 CD55P08174 381 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 CELA3BP08861 270 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 CD200P41217 278 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 CLDN18P56856 261 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 FAM58AQ8N1B3 248 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 APOBEC3DQ96AK3 386 aaPredicted RBP12.21□□□□□ -0.46
ERCC3-202ENST00000426778 OR51M1Q9H341 326 aa12.21□□□□□ -0.46
ERCC3-202ENST00000426778 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 KIAA1324LA8MWY0 1029 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-202ENST00000426778 NDUFS6O75380 124 aaKnown RBP12.2□□□□□ -0.46
ERCC3-202ENST00000426778 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 SOD3P08294 240 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 TLE4Q04727 773 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 OR5D13Q8NGL4 314 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-202ENST00000426778 DMXL2Q8TDJ6 3036 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 DMXL1Q9Y485 3027 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 DEGS1O15121 323 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 MT-CO3P00414 261 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 RAB2AP61019 212 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-202ENST00000426778 LILRB2Q8N423 598 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF610Q8N9Z0 462 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 APH1AQ96BI3 265 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-202ENST00000426778 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
ERCC3-202ENST00000426778 UBE2L5PA0A1B0GUS4 154 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 PLGLB1Q02325 96 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF506Q5JVG8 444 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 C6orf15Q6UXA7 325 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-202ENST00000426778 OR5P3Q8WZ94 311 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
ERCC3-202ENST00000426778 PLPPR2Q96GM1 343 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 FOXJ2Q9P0K8 574 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 TRAPPC2LQ9UL33 140 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 ANKRD30BLA7E2S9 258 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 OR10V1Q8NGI7 309 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 FRZBQ92765 325 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 MALSU1Q96EH3 234 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 RHOVQ96L33 236 aa12.19□□□□□ -0.46
ERCC3-202ENST00000426778 BOKQ9UMX3 212 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-202ENST00000426778 CDIPTO14735 213 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 SYNGR2O43760 224 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 SYNGR4O95473 234 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 SERPINA7P05543 415 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 HOXB1P14653 301 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-202ENST00000426778 HOXA5P20719 270 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 PMELP40967 661 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 HLA-DRB3P79483 266 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 IL24Q13007 206 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 TESK1Q15569 626 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF383Q8NA42 475 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 GATAD1Q8WUU5 269 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 TTTY12Q9BZ98 90 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 DEFB127Q9H1M4 99 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 GVINP1Q7Z2Y8 2422 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 ROS1P08922 2347 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 LOC102723971A0A1B0GUV8 181 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 RAMP3O60896 148 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 OR1C1Q15619 314 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 Q8NFD4 153 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 TECTBQ96PL2 329 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
ERCC3-202ENST00000426778 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
ERCC3-202ENST00000426778 A0A1B0GW64 132 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 KRASP01116 189 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 GRPP07492 148 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 CYC1P08574 325 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TUBG1P23258 451 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 CEACAM6P40199 344 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 PLP2Q04941 152 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 BAXQ07812 192 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 H1FOOQ8IZA3 346 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TMEM251Q8N6I4 163 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TPRX1Q8N7U7 411 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 OR5T1Q8NG75 326 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ABHD5Q8WTS1 349 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 SNX22Q96L94 193 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 RBKSQ9H477 322 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms