RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
RPL28-202ENST00000426763 ODAMA1E959 279 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 CHST1O43916 411 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 PSG2P11465 335 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 MC5RP33032 325 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 ABLIM2Q6H8Q1 611 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 CD200R1LQ6Q8B3 271 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 TVP23CQ96ET8 276 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 SAT2Q96F10 170 aaPredicted RBP11.93□□□□□ -0.5
RPL28-202ENST00000426763 KCNK7Q9Y2U2 307 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 RPL35P42766 123 aaKnown RBP11.93□□□□□ -0.5
RPL28-202ENST00000426763 KCNMB1Q16558 191 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
RPL28-202ENST00000426763 FBXL17Q9UF56 701 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 HPRT1P00492 218 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 PRR27Q6MZM9 219 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 UNQ9370/PRO34162Q6UXP9 181 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 CTRB1P17538 263 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 CTRB2Q6GPI1 263 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
RPL28-202ENST00000426763 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ZNF260Q3ZCT1 412 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ZNF561Q8N587 486 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 LRRC75AQ8NAA5 344 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 OR5P3Q8WZ94 311 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 IDI2-AS1Q9NZ38 188 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 SEMA5BQ9P283 1151 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ORM2P19652 201 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 IGHV1-2P23083 117 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
RPL28-202ENST00000426763 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
RPL28-202ENST00000426763 PJVKQ0ZLH3 352 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ZNF788Q6ZQV5 615 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 C20orf202A1L168 122 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ADAM10O14672 748 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 NCR3LG1Q68D85 454 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ADAD2Q8NCV1 583 aaKnown RBP11.92□□□□□ -0.5
RPL28-202ENST00000426763 CALYQ9NYX4 217 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 DOK5Q9P104 306 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 SS18L1O75177 396 aaPredicted RBP11.92□□□□□ -0.5
RPL28-202ENST00000426763 OR2C1O95371 312 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 ZNF79Q15937 498 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 TBR1Q16650 682 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 C14orf79Q96F83 325 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 HILPDAQ9Y5L2 63 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 MAP1LC3B2A6NCE7 125 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 DYNLT3P51808 116 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 IGSF11Q5DX21 431 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 MAP1LC3BQ9GZQ8 125 aa11.92□□□□□ -0.5
RPL28-202ENST00000426763 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 HMSDA8MTL9 139 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
RPL28-202ENST00000426763 PTGDSP41222 190 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 BVESQ8NE79 360 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
RPL28-202ENST00000426763 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
RPL28-202ENST00000426763 TMEM33P57088 247 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 OR10G9Q8NGN4 311 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 OR10G7Q8NGN6 311 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 ATP5SQ99766 215 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 CHODLQ9H9P2 273 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 U3KQ87 197 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 TANC1Q9C0D5 1861 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 J3QR06 171 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 PIN1P1O15428 100 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 OR1B1Q8NGR6 318 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
RPL28-202ENST00000426763 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 SCTP09683 121 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 TMEM50BP56557 158 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 BSPH1Q075Z2 132 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 MIDNQ504T8 468 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
RPL28-202ENST00000426763 IGHV2OR16-5A0A0B4J2B6 119 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 PLA2G10O15496 165 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 MOGAT2Q3SYC2 334 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 TCTEX1D1Q8N7M0 179 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 PLSCR3Q9NRY6 295 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.5
RPL28-202ENST00000426763 TRBV23-1A0A0A0MS06 115 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms