RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SULT4A1Q9BR01 284 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 URM1Q9BTM9 101 aaKnown RBP10.18□□□□□ -0.78
GPC1-204ENST00000426280 FAAP24Q9BTP7 215 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 RANBP3Q9H6Z4 567 aaPredicted RBP10.18□□□□□ -0.78
GPC1-204ENST00000426280 SCOCQ9UIL1 159 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 RAB22AQ9UL26 194 aa10.18□□□□□ -0.78
GPC1-204ENST00000426280 TMEM30CPA0ZSE6 113 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 FAM90A9PA6NNJ1 464 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 FOXI3A8MTJ6 420 aaPredicted RBP10.17□□□□□ -0.78
GPC1-204ENST00000426280 ADARB2-AS1A8MUL3 147 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 TOR1AO14656 332 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 SLC31A2O15432 143 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 RCC1P18754 421 aaPredicted RBP10.17□□□□□ -0.78
GPC1-204ENST00000426280 KCNJ3P48549 501 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 ZNF134P52741 427 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 PRRX1P54821 245 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 HERPUD1Q15011 391 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 C10orf99Q6UWK7 81 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 OR2T6Q8NHC8 308 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 FAM110DQ8TAY7 271 aaPredicted RBP10.17□□□□□ -0.78
GPC1-204ENST00000426280 ARL11Q969Q4 196 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 NEDD4LQ96PU5 975 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 WNT10AQ9GZT5 417 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 MMP28Q9H239 520 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 SPACA1Q9HBV2 294 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 ETAA1Q9NY74 926 aa10.17□□□□□ -0.78
GPC1-204ENST00000426280 VWFP04275 2813 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 A0A1W2PPI3 338 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 C12orf77C9JDV5 145 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 TIMM23O14925 209 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 PLAC9Q5JTB6 97 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 GAPTQ8N292 157 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 DRAM1Q8N682 238 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 OR1L1Q8NH94 360 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 ARHGAP5-AS1Q96IT6 56 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 DCSTAMPQ9H295 470 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 RAB18Q9NP72 206 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 MEGF8Q7Z7M0 2845 aa10.16□□□□□ -0.78
GPC1-204ENST00000426280 ZNF736B4DX44 427 aaPredicted RBP10.15□□□□□ -0.78
GPC1-204ENST00000426280 M0QZ24 198 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 RAB27BO00194 218 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 RAB6AP20340 208 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 GZMHP20718 246 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 REG1BP48304 166 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 HNF4GQ14541 408 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 SPCS2Q15005 226 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 Q6ZTK2 550 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 ZNF439Q8NDP4 499 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 OR56B1Q8NGI3 324 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 OR56B4Q8NH76 319 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 MRPL30Q8TCC3 161 aaKnown RBP10.15□□□□□ -0.78
GPC1-204ENST00000426280 CAPSLQ8WWF8 208 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 RBM14Q96PK6 669 aaKnown RBP10.15□□□□□ -0.78
GPC1-204ENST00000426280 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
GPC1-204ENST00000426280 SLC25A33Q9BSK2 321 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 PECRQ9BY49 303 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 PRSS22Q9GZN4 317 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 ATG5Q9H1Y0 275 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 PLEKHJ1Q9NW61 149 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 AK3Q9UIJ7 227 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
GPC1-204ENST00000426280 A0A075B6Q4 140 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 SDCBPO00560 298 aaPredicted RBP10.14□□□□□ -0.79
GPC1-204ENST00000426280 ORC5O43913 435 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 GLAP06280 429 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 SNRNP70P08621 437 aaKnown RBP10.14□□□□□ -0.79
GPC1-204ENST00000426280 RANBP1P43487 201 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 GNMTQ14749 295 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 ABCA11PQ4W5N1 156 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 CT45A1Q5HYN5 189 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 C1QL4Q86Z23 238 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 OR52L2PQ8NGH6 319 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 OR10V1Q8NGI7 309 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 OR10R2Q8NGX6 335 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 CT45A3Q8NHU0 189 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 ST6GALNAC6Q969X2 333 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 SLC25A46Q96AG3 418 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 SLC25A38Q96DW6 304 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 CITED2Q99967 270 aaPredicted RBP10.14□□□□□ -0.79
GPC1-204ENST00000426280 MMP27Q9H306 513 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 RHBDL2Q9NX52 303 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 GFOD1Q9NXC2 390 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 PITPNC1Q9UKF7 332 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 ELF5Q9UKW6 265 aaPredicted RBP10.14□□□□□ -0.79
GPC1-204ENST00000426280 TRAPPC2LQ9UL33 140 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 KCNK7Q9Y2U2 307 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 CEPT1Q9Y6K0 416 aa10.14□□□□□ -0.79
GPC1-204ENST00000426280 LINC01548A6NM66 108 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 HBZP02008 142 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 LPLP06858 475 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 GNB3P16520 340 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 BRS3P32247 399 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 DEFA6Q01524 100 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 NSUN5P1Q3KNT7 163 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms