RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PARP11Q9NR21 331 aa11.96□□□□□ -0.49
RPUSD3-204ENST00000424438 DHDHQ9UQ10 334 aa11.96□□□□□ -0.49
RPUSD3-204ENST00000424438 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
RPUSD3-204ENST00000424438 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 A0A087WW49 117 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 C12orf77C9JDV5 145 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 SOX15O60248 233 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 CA11O75493 328 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 HTR3BO95264 441 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 BLVRBP30043 206 aaPredicted RBP11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 RAB40BQ12829 278 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 ZNF251Q9BRH9 671 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 RCC2Q9P258 522 aaKnown RBP11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 GNG12Q9UBI6 72 aa11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 EXOGQ9Y2C4 368 aaKnown RBP11.95□□□□□ -0.5
RPUSD3-204ENST00000424438 IGHV3-43A0A0B4J1X8 118 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 J3QLW9 94 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 AIPO00170 330 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 CSTBP04080 98 aaKnown RBP11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 IGHV3-43DP0DP04 118 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 ZNF19P17023 458 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 POLR2IP36954 125 aaKnown RBP11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 SNRPGP62308 76 aaKnown RBP11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 HAGHQ16775 308 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 OR10K1Q8NGX5 313 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 OR5AK2Q8NH90 309 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 NUBP2Q9Y5Y2 271 aa11.94□□□□□ -0.5
RPUSD3-204ENST00000424438 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 SLC25A17O43808 307 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 FASP25445 335 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 TMEM267Q0VDI3 215 aaPredicted RBP11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 FAM71F2Q6NXP2 309 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 OR51A2Q8NGJ7 313 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 RHOVQ96L33 236 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 SLA2Q9H6Q3 261 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 TMEM138Q9NPI0 162 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 RNF150Q9ULK6 438 aa11.93□□□□□ -0.5
RPUSD3-204ENST00000424438 A0A1W2PN81 502 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 H0Y980 276 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 SC5DO75845 299 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 HBZP02008 142 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 GLAP06280 429 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 CD2P06729 351 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 FCGR1AP12314 374 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 GTF2F2P13984 249 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 ZP3P21754 424 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 CHRNA7P36544 502 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 NDPQ00604 133 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 GPR176Q14439 515 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 MOGAT2Q3SYC2 334 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 MORN2Q502X0 79 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 ANKRD13BQ86YJ7 626 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 ODF3L1Q8IXM7 274 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 CCDC197Q8NCU1 140 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 TSEN15Q8WW01 171 aaKnown RBP11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 FAM192AQ9GZU8 254 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
RPUSD3-204ENST00000424438 PLECQ15149 4684 aaKnown RBP11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 GYG2O15488 501 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 CDRT1O95170 752 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 HTD2P86397 168 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 SYT6Q5T7P8 510 aaPredicted RBP11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 UBALD1Q8TB05 177 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 NEK7Q8TDX7 302 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 S100A13Q99584 98 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 PDCD1LG2Q9BQ51 273 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 ABHD14AQ9BUJ0 271 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 ALG8Q9BVK2 526 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 FBXO7Q9Y3I1 522 aa11.91□□□□□ -0.5
RPUSD3-204ENST00000424438 MCRIP1C9JLW8 97 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 YPEL1O60688 119 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 CNTFRP26992 372 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 CX3CL1P78423 397 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms