RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TSPAN31Q12999 210 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 UBE2V2Q15819 145 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 C6orf141Q5SZD1 244 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 Q6ZR54 194 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 OR2C3Q8N628 320 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 OR2T33Q8NG76 320 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 OR5D18Q8NGL1 313 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 NEK7Q8TDX7 302 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 ASB9Q96DX5 294 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 C16orf45Q96MC5 204 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-203ENST00000424270 PHB2Q99623 299 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 CCDC28BQ9BUN5 200 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 PARP12Q9H0J9 701 aaKnown RBP4.64□□□□□ -1.67
SDCBP-203ENST00000424270 SSU72Q9NP77 194 aaKnown RBP4.64□□□□□ -1.67
SDCBP-203ENST00000424270 NKIRAS1Q9NYS0 192 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 MDFICQ9P1T7 246 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 NUFIP1Q9UHK0 495 aaKnown RBP4.64□□□□□ -1.67
SDCBP-203ENST00000424270 PFDN2Q9UHV9 154 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 KLHDC2Q9Y2U9 406 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 SNX5Q9Y5X3 404 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 V9GYS6 101 aa4.64□□□□□ -1.67
SDCBP-203ENST00000424270 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 FCN1O00602 326 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 RRHO14718 337 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MRASO14807 208 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 SLC31A2O15432 143 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MPPED1O15442 326 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 SYT7O43581 403 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 CA2P00918 260 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 AMBPP02760 352 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 TTRP02766 147 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 GZMHP20718 246 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 CBLN1P23435 193 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 CRIP2P52943 208 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 HCCSP53701 268 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 EXOSC2Q13868 293 aaKnown RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 FXYD3Q14802 87 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 LINC01590Q5TEZ4 76 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF343Q6P1L6 599 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 BTNL8Q6UX41 500 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF367Q7RTV3 350 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 LINC00311Q8N616 119 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 NPBQ8NG41 125 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 OR51T1Q8NGJ9 327 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 OR14K1Q8NGZ2 314 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 CCDC107Q8WV48 283 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MRPS24Q96EL2 167 aaKnown RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 GALNT14Q96FL9 552 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 USMG5Q96IX5 58 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MRPL20Q9BYC9 149 aaKnown RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 NMNAT2Q9BZQ4 307 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 COMMD4Q9H0A8 199 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 CSTL1Q9H114 145 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MOB1AQ9H8S9 216 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 MAP6D1Q9H9H5 199 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 IL1RAPQ9NPH3 570 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 GFOD1Q9NXC2 390 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 NDUFAF4Q9P032 175 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 METTL1Q9UBP6 276 aaKnown RBP4.63□□□□□ -1.67
SDCBP-203ENST00000424270 OR52A1Q9UKL2 312 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 BAIAP2Q9UQB8 552 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 V9GYQ6 96 aa4.63□□□□□ -1.67
SDCBP-203ENST00000424270 TMEM30CPA0ZSE6 113 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 DHRS7CA6NNS2 312 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 DYNC1I1O14576 645 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 SLC22A1O15245 554 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 SPINT2O43291 252 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 LANCL1O43813 399 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 GMNNO75496 209 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 APOL3O95236 402 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 SOX14O95416 240 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 CA1P00915 261 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-203ENST00000424270 MRPL3P09001 348 aaKnown RBP4.62□□□□□ -1.67
SDCBP-203ENST00000424270 APELAP0DMC3 54 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 CGB3P0DN86 165 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 CGB7P0DN87 165 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 TMEM225BP0DP42 221 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 EGR2P11161 476 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-203ENST00000424270 ZNF20P17024 532 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 PRKACBP22694 351 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 OR3A3P47888 321 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 GSSP48637 474 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 ACTR3P61158 418 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 ATP5G2Q06055 141 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 PDZK1IP1Q13113 114 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 TMEM187Q14656 261 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 MICAQ29983 383 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 C8orf31Q8N9H6 132 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 UXS1Q8NBZ7 420 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 OR52M1Q8NGK5 317 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 CD300LFQ8TDQ1 290 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 MCUR1Q96AQ8 359 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 NICN1Q9BSH3 213 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 CHRDL1Q9BU40 450 aa4.62□□□□□ -1.67
SDCBP-203ENST00000424270 SSBP4Q9BWG4 385 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-203ENST00000424270 MRPL18Q9H0U6 180 aaKnown RBP4.62□□□□□ -1.67
SDCBP-203ENST00000424270 HRH4Q9H3N8 390 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms