RNA–Protein interactions for RNA: ENST00000423058.6

SCN1A-204, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN1A, Length 8,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-204ENST00000423058 ZNF236Q9UL36 1845 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 CDIPTO14735 213 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TEX30Q5JUR7 227 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 GLCCI1Q86VQ1 547 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 OR8B12Q8NGG6 310 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 GPA33Q99795 319 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 AUNIPQ9H7T9 357 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 KLK11Q9UBX7 282 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ANK1P16157 1881 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 RBFOX3A6NFN3 312 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 GEMIN2O14893 280 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 RBFOX2O43251 390 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ITGBL1O95965 494 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 IGLV3-25P01717 112 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 FGF5P12034 268 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 LGALS3P17931 250 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 CTSSP25774 331 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 RPS27P42677 84 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 WNT3P56703 355 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ZNF770Q6IQ21 691 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 VSTM2LQ96N03 204 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 NAA50Q9GZZ1 169 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 HILPDAQ9Y5L2 63 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 BRCA1P38398 1863 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 PRR33A8MZF0 331 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 H3BMH7 237 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ADAP1O75689 374 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 CCR2P41597 374 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 SH2D5Q6ZV89 423 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TMEM251Q8N6I4 163 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TBX15Q96SF7 602 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 KCNK17Q96T54 332 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 DDA1Q9BW61 102 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 OR2W1Q9Y3N9 320 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 RNF115Q9Y4L5 304 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 FREM3P0C091 2139 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 IGHV3OR15-7A0A075B7D8 119 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 FFAR1O14842 300 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 FAM157CP0CG43 387 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TFPI2P48307 235 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 MFAP4P55083 255 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 SELENOTP62341 195 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 FMODQ06828 376 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 THSD4Q6ZMP0 1018 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ZBTB44Q8NCP5 570 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ZCCHC14Q8WYQ9 949 aaKnown RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TMEM70Q9BUB7 260 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 GPR61Q9BZJ8 451 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 TMEM140Q9NV12 185 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 PLEKHB1Q9UF11 243 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-204ENST00000423058 NCKAP5O14513 1909 aa6.02□□□□□ -1.45
SCN1A-204ENST00000423058 ZNF646O15015 1829 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 SPTA1P02549 2419 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 CEACAM18A8MTB9 384 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 APELAP0DMC3 54 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 DCAF10Q5QP82 559 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 SMOC1Q9H4F8 434 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 CISD1Q9NZ45 108 aaKnown RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 IL19Q9UHD0 177 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 A0A1B0GTH9 108 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 H7C1H1 209 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 AP4M1O00189 453 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 CTAG2O75638 210 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 PDCD1Q15116 288 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 C10orf128Q5T292 105 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 TMEM88Q6PEY1 159 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 DTX2Q86UW9 622 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 MTURNQ8N3F0 131 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 SGMS2Q8NHU3 365 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 SNX22Q96L94 193 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 PLA2G2FQ9BZM2 168 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 FSCN3Q9NQT6 498 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 hCG_38984A0A1B0GV85 526 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 IFITM10A6NMD0 228 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 A8MWL6 223 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 ZNF688P0C7X2 276 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 IL9P15248 144 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 NMUP48645 174 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 FGF8P55075 233 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 COL10A1Q03692 680 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 KLRB1Q12918 225 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 KLF9Q13886 244 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 TMEM30BQ3MIR4 351 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 LHFPL5Q8TAF8 219 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 VGLL1Q99990 258 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 OR2H1Q9GZK4 316 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 DUSP21Q9H596 190 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 PRDM7Q9NQW5 492 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 ZNF107Q9UII5 783 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 TRPM3Q9HCF6 1732 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 J3QT63 122 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 CKS2P33552 79 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 ZNF137PP52743 207 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
SCN1A-204ENST00000423058 TFF2Q03403 129 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 KIR2DL4Q99706 377 aa6.01□□□□□ -1.45
SCN1A-204ENST00000423058 LPAR5Q9H1C0 372 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms