RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 GNB1P62873 340 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 RUNX1Q01196 453 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 STX3Q13277 289 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 TRAM2Q15035 370 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 HLA-DRB5Q30154 266 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 CEACAM21Q3KPI0 293 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 FGD3Q5JSP0 725 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 LCN12Q6JVE5 192 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 DPY19L2P2Q6ZN68 376 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 DCXRQ7Z4W1 244 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 TGIF2LXQ8IUE1 241 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 IFT20Q8IY31 132 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 FAM86B1Q8N7N1 296 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 OR4D6Q8NGJ1 314 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 AQP3Q92482 292 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 FAM46BQ96A09 425 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 FLYWCH2Q96CP2 140 aaKnown RBP3.66□□□□□ -1.82
SFXN1-202ENST00000421887 SLAMF6Q96DU3 332 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 PKNOX2Q96KN3 472 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 PRRC1Q96M27 445 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 ERMAPQ96PL5 475 aaPredicted RBP3.66□□□□□ -1.82
SFXN1-202ENST00000421887 OR8B4Q96RC9 309 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 NMNAT3Q96T66 252 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 SORT1Q99523 831 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 RASL11BQ9BPW5 248 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 NEURL2Q9BR09 285 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 C20orf27Q9GZN8 174 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 ABCG5Q9H222 651 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 OR51I2Q9H344 312 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 NIPAL2Q9H841 368 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 Q9H8V8 135 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 GNB4Q9HAV0 340 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 PLEKHA3Q9HB20 300 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 PLEKHA1Q9HB21 404 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 WSB1Q9Y6I7 421 aa3.66□□□□□ -1.82
SFXN1-202ENST00000421887 TRGV10A0A0A0MS01 117 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 A0A0B4J203 849 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 A0A0J9YWU9 116 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 OR5B21A6NL26 309 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 ARPC1BO15143 372 aaKnown RBP3.65□□□□□ -1.83
SFXN1-202ENST00000421887 BIRC5O15392 142 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 IGLV1-47P01700 117 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 IGLV1-51P01701 117 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 IGF1P05019 195 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 TFAP2AP05549 437 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 CDK2P24941 298 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 SOX6P35712 828 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 RPS27P42677 84 aaKnown RBP3.65□□□□□ -1.83
SFXN1-202ENST00000421887 HAAOP46952 286 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 RAB7AP51149 207 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 GRK1Q15835 563 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 ODF4Q2M2E3 257 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 PRAMEF5Q5TYX0 476 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 SLX4IPQ5VYV7 408 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF573Q86YE8 665 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.65□□□□□ -1.83
SFXN1-202ENST00000421887 MSRB3Q8IXL7 192 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 MMD2Q8IY49 270 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 LINC00471Q8N535 108 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 TPRX1Q8N7U7 411 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 MNS1Q8NEH6 495 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 PROKR2Q8NFJ6 384 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 OR5A2Q8NGI9 324 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 OR4K13Q8NH42 304 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 HPSE2Q8WWQ2 592 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 TPD52L3Q96J77 140 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF488Q96MN9 340 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 KCTD7Q96MP8 289 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 PARD6BQ9BYG5 372 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 IKZF5Q9H5V7 419 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 GPR173Q9NS66 373 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 SLC35D1Q9NTN3 355 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 NDE1Q9NXR1 346 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 SLC2A8Q9NY64 477 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 DNAJC27Q9NZQ0 273 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 CCDC167Q9P0B6 97 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 ENPP5Q9UJA9 477 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 COPS3Q9UNS2 423 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 FOXA2Q9Y261 457 aaPredicted RBP3.65□□□□□ -1.83
SFXN1-202ENST00000421887 OR2W1Q9Y3N9 320 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 GMEB1Q9Y692 573 aa3.65□□□□□ -1.83
SFXN1-202ENST00000421887 IGHV4OR15-8A0A075B7B6 117 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 A0A087WW49 117 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 A0A087X0K7 114 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 FUOMA2VDF0 154 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 ZNF593O00488 134 aaPredicted RBP3.64□□□□□ -1.83
SFXN1-202ENST00000421887 CDC42EP2O14613 210 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 ARPC2O15144 300 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 TYROBPO43914 113 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 MMP23AO75900 390 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 KDM4BO94953 1096 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 TXNDC12O95881 172 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 HSPB1P04792 205 aaKnown RBP3.64□□□□□ -1.83
SFXN1-202ENST00000421887 IFNA4P05014 189 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 GABRR1P24046 479 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 NFYBP25208 207 aa3.64□□□□□ -1.83
SFXN1-202ENST00000421887 YAP1P46937 504 aaKnown RBP3.64□□□□□ -1.83
SFXN1-202ENST00000421887 OR3A1P47881 315 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms