RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
DDX55-203ENST00000421670 TMEM133Q9H2Q1 129 aa12.84□□□□□ -0.35
DDX55-203ENST00000421670 GSX1Q9H4S2 264 aaPredicted RBP12.84□□□□□ -0.35
DDX55-203ENST00000421670 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
DDX55-203ENST00000421670 OR2S2Q9NQN1 319 aa12.84□□□□□ -0.35
DDX55-203ENST00000421670 GNG12Q9UBI6 72 aa12.84□□□□□ -0.35
DDX55-203ENST00000421670 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
DDX55-203ENST00000421670 IGHV3OR16-10A0A075B7F0 116 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 A8MV72 311 aaPredicted RBP12.83□□□□□ -0.36
DDX55-203ENST00000421670 RNASEK-C17orf49H0YIS7 233 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 RBBP9O75884 186 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 ACTBP60709 375 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 ACTG1P63261 375 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 CHRFAM7AQ494W8 412 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 HCP5Q6MZN7 132 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 TRIM63Q969Q1 353 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 CABLES2Q9BTV7 478 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 RAB9BQ9NP90 201 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
DDX55-203ENST00000421670 RBMX2Q9Y388 322 aaKnown RBP12.83□□□□□ -0.36
DDX55-203ENST00000421670 IGHV2-26A0A0B4J1V2 119 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 HSPA12AO43301 675 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 NAT1P18440 290 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 GNG10P50151 68 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 HTD2P86397 168 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 PNKDQ8N490 385 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 OR10A7Q8NGE5 316 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 THAP7Q9BT49 309 aaPredicted RBP12.82□□□□□ -0.36
DDX55-203ENST00000421670 PARP12Q9H0J9 701 aaKnown RBP12.82□□□□□ -0.36
DDX55-203ENST00000421670 ZNRD1Q9P1U0 126 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
DDX55-203ENST00000421670 A0A1W2PPE3 182 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 A0A1W2PRD5 423 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 A0A1W2PRF3 423 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 A0A1W2PRM7 423 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 PMP2P02689 132 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 HRH1P35367 487 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 LSAMPQ13449 338 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 BAK1Q16611 211 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 KLF17Q5JT82 389 aaPredicted RBP12.81□□□□□ -0.36
DDX55-203ENST00000421670 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 GDPD1Q8N9F7 314 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 OR52M1Q8NGK5 317 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 A0A087X0M5 115 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 TRBV6-7A0A0A0MS04 114 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 A0A1B0GX30 115 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 J3QRK9 145 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 M0QYG6 137 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 CD3DP04234 171 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 ZBTB25P24278 435 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 RFX2P48378 723 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 TMEM30BQ3MIR4 351 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 NCR3LG1Q68D85 454 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 OR13D1Q8NGV5 346 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 OR5H2Q8NGV7 314 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 GINS4Q9BRT9 223 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 CLEC7AQ9BXN2 247 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 WDR12Q9GZL7 423 aaKnown RBP12.81□□□□□ -0.36
DDX55-203ENST00000421670 HEXA-AS1Q9H8Q6 139 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 EHFQ9NZC4 300 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 PSG11Q9UQ72 335 aa12.81□□□□□ -0.36
DDX55-203ENST00000421670 ZNF736B4DX44 427 aaPredicted RBP12.8□□□□□ -0.36
DDX55-203ENST00000421670 SLC31A2O15432 143 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 NFYAP23511 347 aaPredicted RBP12.8□□□□□ -0.36
DDX55-203ENST00000421670 CD34P28906 385 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 CEACAM6P40199 344 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 TAS2R46P59540 309 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 SSBP1Q04837 148 aaKnown RBP12.8□□□□□ -0.36
DDX55-203ENST00000421670 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 CDK10Q15131 360 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 MORN2Q502X0 79 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 RUSC1-AS1Q66K80 236 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.36
DDX55-203ENST00000421670 FAAP20Q6NZ36 180 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 NAV3Q8IVL0 2385 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 OR4D10Q8NGI6 311 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 RDH8Q9NYR8 311 aa12.8□□□□□ -0.36
DDX55-203ENST00000421670 ANKRD20A5PA0PJZ0 165 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 DIRAS3O95661 229 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 ARG1P05089 322 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 CSF1P09603 554 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 OR5H8P0DN80 308 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 OR3A3P47888 321 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 ZNF134P52741 427 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 GPR157Q5UAW9 335 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 TRIQKQ629K1 86 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 TINAGL1Q9GZM7 467 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms