RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ZNF497Q6ZNH5 498 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 OR52M1Q8NGK5 317 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 OR52N1Q8NH53 320 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 RHOXF1Q8NHV9 184 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 NEK7Q8TDX7 302 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 GON7Q9BXV9 100 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
LINC00339-203ENST00000420503 ANKRD60Q9BZ19 345 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 ERVK13-1Q9NX77 482 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 VSIG4Q9Y279 399 aa9.94□□□□□ -0.82
LINC00339-203ENST00000420503 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 RPSAP08865 295 aaKnown RBP9.93□□□□□ -0.82
LINC00339-203ENST00000420503 RCC1P18754 421 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-203ENST00000420503 KCNJ3P48549 501 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 RAB9AP51151 201 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF137PP52743 207 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 ACTBP60709 375 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 SLC22A6Q4U2R8 563 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 MEDAGQ5VYS4 303 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 ODF3L1Q8IXM7 274 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 C8orf31Q8N9H6 132 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 APH1BQ8WW43 257 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 OR51J1Q9H342 316 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 IFT22Q9H7X7 185 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 GNG12Q9UBI6 72 aa9.93□□□□□ -0.82
LINC00339-203ENST00000420503 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 FAM90A10PA6NDY2 464 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 ORC5O43913 435 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 ATP6V1G2O95670 118 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 HBZP02008 142 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 GZMHP20718 246 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 IL3RAP26951 378 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 OR3A3P47888 321 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 RUNX1Q01196 453 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 NHLRC3Q5JS37 347 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 SYT6Q5T7P8 510 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-203ENST00000420503 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 TTC23Q5W5X9 447 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 SYS1Q8N2H4 156 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 DHRSXQ8N5I4 330 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF555Q8NEP9 628 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 OR52I1Q8NGK6 324 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 TOLLIPQ9H0E2 274 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 METTL9Q9H1A3 318 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
LINC00339-203ENST00000420503 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
LINC00339-203ENST00000420503 WBP4O75554 376 aaKnown RBP9.91□□□□□ -0.82
LINC00339-203ENST00000420503 LALBAP00709 142 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 LIMS3P0CW19 117 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 LIMS4P0CW20 117 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 IGHV4-30-4P0DP06 118 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF93P35789 620 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-203ENST00000420503 PPP1CCP36873 323 aaKnown RBP9.91□□□□□ -0.82
LINC00339-203ENST00000420503 INSL3P51460 131 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 OR2G6Q5TZ20 316 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 Q8N1Y9 231 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 CYGBQ8WWM9 190 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 NABP2Q9BQ15 211 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 GAB2Q9UQC2 676 aa9.91□□□□□ -0.82
LINC00339-203ENST00000420503 RRP15Q9Y3B9 282 aaKnown RBP9.91□□□□□ -0.82
LINC00339-203ENST00000420503 TRAV8-7A0A075B6U6 113 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 A0A1W2PN81 502 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 FCN1O00602 326 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 MAGEB3O15480 346 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 LANCL1O43813 399 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 GNAO1P09471 354 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 CHRNA7P36544 502 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 CAPGP40121 348 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 AQP4P55087 323 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 SMN1Q16637 294 aaKnown RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 TMEM106AQ96A25 262 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 VCXQ9H320 206 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms