RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 VGLL3A8MV65 326 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 GEMIN2O14893 280 aaKnown RBP5.57□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF780AO75290 641 aaPredicted RBP5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR7C1O76099 320 aaPredicted RBP5.57□□□□□ -1.52
HMGN1-205ENST00000419378 MAS1P04201 325 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 GTF2F2P13984 249 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CRHBPP24387 322 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CDK2P24941 298 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 GLP1RP43220 463 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 KCNJ3P48549 501 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 SSX2Q16385 188 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 LY6EQ16553 131 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 C17orf58Q2M2W7 97 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 MPV17LQ2QL34 196 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 SLC22A6Q4U2R8 563 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 FAM27D1Q5T7N8 215 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 RSBN1Q5VWQ0 802 aaPredicted RBP5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OLFML2AQ68BL7 652 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 AWAT2Q6E213 333 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR52W1Q6IF63 320 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 Q6ZSV7 163 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 LINC00596Q86U02 117 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 LYPD6Q86Y78 171 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 NKAIN3Q8N8D7 197 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 SUMF2Q8NBJ7 301 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR4D6Q8NGJ1 314 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR4P4Q8NGL7 312 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR13A1Q8NGR1 328 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 LINC01006Q8NI28 216 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 PLPPR1Q8TBJ4 325 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CORO2AQ92828 525 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 MALSU1Q96EH3 234 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 RITA1Q96K30 269 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CNBD2Q96M20 576 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 TMED9Q9BVK6 235 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 CLEC7AQ9BXN2 247 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 SLITRK2Q9H156 845 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 TAS2R3Q9NYW6 316 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 OR6C3Q9NZP0 311 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 KIF25Q9UIL4 384 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 ST3GAL6Q9Y274 331 aa5.57□□□□□ -1.52
HMGN1-205ENST00000419378 MRPS28Q9Y2Q9 187 aaKnown RBP5.57□□□□□ -1.52
HMGN1-205ENST00000419378 A0A087X0M5 115 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 KBTBD11-OT1A0A1B0GTJ5 212 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 A0A1B0GX30 115 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF729A6NN14 1252 aaPredicted RBP5.56□□□□□ -1.52
HMGN1-205ENST00000419378 CHST1O43916 411 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 SC5DO75845 299 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 TSPAN9O75954 239 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 IL1AP01583 271 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 VHLP40337 213 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 RAB13P51153 203 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PROK1P58294 105 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PAX5Q02548 391 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 SRSF4Q08170 494 aaKnown RBP5.56□□□□□ -1.52
HMGN1-205ENST00000419378 GPR176Q14439 515 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 FAM189A2Q15884 450 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 ACSM3Q53FZ2 586 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 RBM48Q5RL73 367 aaKnown RBP5.56□□□□□ -1.52
HMGN1-205ENST00000419378 UTF1Q5T230 341 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 ATAD3CQ5T2N8 411 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 MINOS1Q5TGZ0 78 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 LIPKQ5VXJ0 399 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM88Q6PEY1 159 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 GLIPR1L1Q6UWM5 242 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 UNQ9370/PRO34162Q6UXP9 181 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PRSS48Q7RTY5 328 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 RTN4RL2Q86UN3 420 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 CDH26Q8IXH8 852 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 ABHD12Q8N2K0 398 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 MS4A15Q8N5U1 240 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 SGMS2Q8NHU3 365 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 NDNFQ8TB73 568 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PIFOQ8TCI5 191 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PHYHIPQ92561 330 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 UFD1Q92890 307 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 UQCC2Q9BRT2 126 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 BARHL1Q9BZE3 327 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 CCDC90BQ9GZT6 254 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 C16orf95Q9H693 158 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF286AQ9HBT8 521 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 PCDHB16Q9NRJ7 776 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 CALYQ9NYX4 217 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 RCC2Q9P258 522 aaKnown RBP5.56□□□□□ -1.52
HMGN1-205ENST00000419378 RAB26Q9ULW5 256 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 TCF19Q9Y242 345 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 MINOS1-NBL1R4GNA1 71 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 VWFP04275 2813 aa5.56□□□□□ -1.52
HMGN1-205ENST00000419378 TRAV39A0A0B4J263 110 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM30CPA0ZSE6 113 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 A6NDX4 124 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 IGLV1-47P01700 117 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SLPIP03973 132 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 UCHL1P09936 223 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 HSMCR30P0CW71 290 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 CGB3P0DN86 165 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 CGB7P0DN87 165 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 LYL1P12980 280 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 MGMTP16455 207 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms