RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 PPP1R1AQ13522 171 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 FCN2Q15485 313 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZFP69Q49AA0 526 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 TMEM155Q4W5P6 130 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 PHLDA2Q53GA4 152 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF660Q6AZW8 331 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 LIN54Q6MZP7 749 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 TGIF2LYQ8IUE0 185 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 C12orf45Q8N5I9 185 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 TPRX1Q8N7U7 411 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZNRF1Q8ND25 227 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR2AK2Q8NG84 335 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR10V1Q8NGI7 309 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR52B4Q8NGK2 314 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR1L1Q8NH94 360 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CASTOR1Q8WTX7 329 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CAPSLQ8WWF8 208 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 H1FXQ92522 213 aaKnown RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ARL11Q969Q4 196 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 MRGPRFQ96AM1 343 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 NEIL1Q96FI4 390 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 LURAP1Q96LR2 239 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF714Q96N38 554 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 TMEM246Q9BRR3 403 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 C5orf66Q9H5L9 145 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 NAA60Q9H7X0 242 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 BARX1Q9HBU1 254 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CALYQ9NYX4 217 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR1A1Q9P1Q5 309 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 KAAG1Q9UBP8 84 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 UBE2J1Q9Y385 318 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 OR2W1Q9Y3N9 320 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 MAB21L2Q9Y586 359 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 DOPEY2Q9Y3R5 2298 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 USF3Q68DE3 2245 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CHD6Q8TD26 2715 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 AKAP6Q13023 2319 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SMG1Q96Q15 3661 aaKnown RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 TRAV39A0A0B4J263 110 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 A0A0B4J2A0 478 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 IGKV1-6A0A0C4DH72 117 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1B0GW55 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1W2PPR1 153 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 C9orf170A2RU37 121 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 CRYM-AS1A6NIL9 109 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 A8MV72 311 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 F2RL2O00254 374 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 B3GALNT1O75752 331 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SLC22A5O76082 557 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SFT2D2O95562 160 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUS4LO95620 317 aaKnown RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 CD8AP01732 235 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L2P0CJ85 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L3P0CJ86 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L4P0CJ87 422 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L5P0CJ88 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L6P0CJ89 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L7P0CJ90 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SULT1A3P0DMM9 295 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SULT1A4P0DMN0 295 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 PLA2G2AP14555 144 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 PI3P19957 117 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 EIF2B2P49770 351 aaKnown RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 PDLIM4P50479 330 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RAB7AP51149 207 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 EFNA4P52798 201 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RND3P61587 244 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RPL31P62899 125 aaKnown RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 HTD2P86397 168 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 GNMTQ14749 295 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SLC9A3R2Q15599 337 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 MSMO1Q15800 293 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 AVPI1Q5T686 147 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4L9Q6RFH8 374 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DHRS11Q6UWP2 260 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 C8orf86Q6ZUL3 223 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 TCTE3Q8IZS6 198 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 UXS1Q8NBZ7 420 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 ADAD2Q8NCV1 583 aaKnown RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 OR5M8Q8NGP6 311 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 UBALD1Q8TB05 177 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RTN4IP1Q8WWV3 396 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-202ENST00000419110 TMEM230Q96A57 120 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 NEURL2Q9BR09 285 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 PDCD10Q9BUL8 212 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RSRP1Q9BUV0 290 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SUCNR1Q9BXA5 334 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 TMPRSS13Q9BYE2 586 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SHARPINQ9H0F6 387 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 OR2D2Q9H210 308 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 OR2S2Q9NQN1 319 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 RDH8Q9NYR8 311 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 TAS2R3Q9NYW6 316 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 DUX4Q9UBX2 424 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 CLN8Q9UBY8 286 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 MIOXQ9UGB7 285 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 SHPKQ9UHJ6 478 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 GPR132Q9UNW8 380 aa4.95□□□□□ -1.62
HMGB3-202ENST00000419110 ABCA2Q9BZC7 2435 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms