RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 WDR1O75083 606 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 DEFA6Q01524 100 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 LPAL2Q16609 132 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 RHOVQ96L33 236 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 DOCK10Q96BY6 2186 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 CLEC18AA5D8T8 446 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 SEC14L6B5MCN3 397 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 CELA3AP09093 270 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 BCL2P10415 239 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 MMP9P14780 707 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 TUBG1P23258 451 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 PLA2G5P39877 138 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 SPATA46Q5T0L3 261 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 CLEC18CQ8NCF0 446 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 SYNGR2O43760 224 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 ARL16Q0P5N6 197 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 OR8G2PQ6IF36 304 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 Q6ZS49 121 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 APOBEC3DQ96AK3 386 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 SNX22Q96L94 193 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 SSX3Q99909 188 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 CXorf65A6NEN9 183 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 CEACAM1P13688 526 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 ZXDAP98168 799 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 OR8G1Q15617 311 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 CLEC12BQ2HXU8 276 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A2PQ658T7 463 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 COLCA1Q6ZS62 124 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 SSX7Q7RTT5 188 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 PPP1R32Q7Z5V6 425 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 H1FOOQ8IZA3 346 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
SEMA3B-203ENST00000419007 A0A1B0GU03 582 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 CLDN34H7C241 214 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 FIP1L1Q6UN15 594 aaKnown RBP12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF295-AS1Q8N0V1 137 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 TRAV24A0A0B4J272 114 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 A0A1W2PR80 420 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF729A6NN14 1252 aaPredicted RBP12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 RHBDL1O75783 438 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ADIRFQ15847 76 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 TRIM61Q5EBN2 209 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 OR10V1Q8NGI7 309 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 RCC1LQ96I51 464 aaKnown RBP12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 GFOD1Q9NXC2 390 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 SIRPB1O00241 398 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 CA6P23280 308 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 USF3Q68DE3 2245 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM58AQ8N1B3 248 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 Q8NFD4 153 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 PRO1933Q9H354 126 aa12.91□□□□□ -0.34
SEMA3B-203ENST00000419007 UBE2L5PA0A1B0GUS4 154 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 DEGS1O15121 323 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 PLP2Q04941 152 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 HIST3H2BBQ8N257 126 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 IL22RA2Q969J5 263 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 HES7Q9BYE0 225 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 PILRBQ9UKJ0 227 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 TRAPPC2LQ9UL33 140 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 TCFL5Q9UL49 500 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 C3AR1Q16581 482 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 OR5A2Q8NGI9 324 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
SEMA3B-203ENST00000419007 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 OR5H1A6NKK0 313 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 LAMTOR5O43504 91 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 RPS16P62249 146 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 GAMTQ14353 236 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 TESK1Q15569 626 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 SAXO1Q8IYX7 474 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 RPUSD4Q96CM3 377 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 RBKSQ9H477 322 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 MDH2P40926 338 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 GFRA1P56159 465 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 HBG1P69891 147 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 HBG2P69892 147 aa12.89□□□□□ -0.35
SEMA3B-203ENST00000419007 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms