RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 HTD2P86397 168 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 AESQ08117 197 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 SNTB1Q13884 538 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 BEX5Q5H9J7 111 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 KRBOX4Q5JUW0 171 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 GPR157Q5UAW9 335 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 MEX3BQ6ZN04 569 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 MOGAT3Q86VF5 341 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF695Q8IW36 515 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 BAP18Q8IXM2 172 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 EIF4E3Q8N5X7 224 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 DMBX1Q8NFW5 382 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 OR1L1Q8NH94 360 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 ANGPTL6Q8NI99 470 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 LRRC20Q8TCA0 184 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 IL1F10Q8WWZ1 152 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 LSM10Q969L4 123 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 GALMQ96C23 342 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 SDSLQ96GA7 329 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 DNTTIP1Q9H147 329 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 BARX1Q9HBU1 254 aaPredicted RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 RNF7Q9UBF6 113 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 RCL1Q9Y2P8 373 aaKnown RBP7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 CACNA1AO00555 2505 aa7.57□□□□□ -1.2
LINCMD1-201ENST00000418518 ATMQ13315 3056 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ROS1P08922 2347 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 TRAV39A0A0B4J263 110 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 A0A1B0GW55 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 RNF212BA8MTL3 300 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 K7N7A8 449 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 F2RL2O00254 374 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ABCD4O14678 606 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ITGB1BP1O14713 200 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 HSPA12AO43301 675 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 GPR137BO60478 399 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 PITX3O75364 302 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L2P0CJ85 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L3P0CJ86 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L4P0CJ87 422 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L5P0CJ88 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L6P0CJ89 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4L7P0CJ90 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 RPL12P30050 165 aaKnown RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 GLIPR1P48060 266 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 TNFAIP6P98066 277 aaPredicted RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 HOXA4Q00056 320 aaPredicted RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ID3Q02535 119 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 BSPH1Q075Z2 132 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ADIPOQQ15848 244 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 AANATQ16613 207 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 TEX36Q5VZQ5 186 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 STUMQ69YW2 141 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 HSD17B13Q7Z5P4 300 aaPredicted RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 WFDC8Q8IUA0 241 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 PDZD9Q8IXQ8 264 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF645Q8N7E2 425 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 TCTEX1D1Q8N7M0 179 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 OR52M1Q8NGK5 317 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 OR13A1Q8NGR1 328 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 PARP12Q9H0J9 701 aaKnown RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ARV1Q9H2C2 271 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 NGBQ9NPG2 151 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 DUX4Q9UBX2 424 aa7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 LSM5Q9Y4Y9 91 aaKnown RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 ANKHD1Q8IWZ3 2542 aaKnown RBP7.56□□□□□ -1.2
LINCMD1-201ENST00000418518 A0A1B0GU03 582 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 ODAMA1E959 279 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 KCNAB3O43448 404 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 SPRY3O43610 288 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 IGKV1-39P01597 117 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 IGKV1D-39P04432 117 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 FGF2P09038 288 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CGB3P0DN86 165 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CGB7P0DN87 165 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 GZMHP20718 246 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 IL2RGP31785 369 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CEACAM6P40199 344 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 NKX2-1P43699 371 aaPredicted RBP7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 GABRA2P47869 451 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CASP6P55212 293 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 P2RX3P56373 397 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 NCMAPQ5T1S8 102 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 ALKBH2Q6NS38 261 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 VHLLQ6RSH7 139 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF561Q8N587 486 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 UBAC2Q8NBM4 344 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 MRGPRDQ8TDS7 321 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 PCNPQ8WW12 178 aaKnown RBP7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 C14orf79Q96F83 325 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 C5orf30Q96GV9 206 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CXorf58Q96LI9 332 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM234AQ9H0X4 552 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 LINC00574Q9H8X3 128 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms