RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CACNA1DQ01668 2161 aa4.84□□□□□ -1.64
NIFKP3-201ENST00000417799 RAI1Q7Z5J4 1906 aaPredicted RBP4.84□□□□□ -1.64
NIFKP3-201ENST00000417799 SPG11Q96JI7 2443 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 USF3Q68DE3 2245 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 COL12A1Q99715 3063 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 TEX13DA0A0J9YY54 714 aaPredicted RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 A0A1W2PS18 150 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM25AB3EWG3 89 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM25CB3EWG5 89 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM25GB3EWG6 89 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 PRKACAP17612 351 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 RBMXP38159 391 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 PITPNBP48739 271 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 VEGFCP49767 419 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 EFNA4P52798 201 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 RBM11P57052 281 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 KRTAP10-9P60411 292 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 GMFBP60983 142 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FGF12P61328 243 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 PNRC1Q12796 327 aaPredicted RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 HFEQ30201 348 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 SMIM21Q3B7S5 101 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 NHLRC3Q5JS37 347 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 SPIN3Q5JUX0 258 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 RAB12Q6IQ22 244 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FIP1L1Q6UN15 594 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 ACP7Q6ZNF0 438 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 BIVMQ86UB2 503 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 LRRC28Q86X40 367 aaPredicted RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 TGIF2LYQ8IUE0 185 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 OSR2Q8N2R0 312 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM89BQ8N5H3 189 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 EMG1Q92979 244 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 YIPF5Q969M3 257 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 GAL3ST1Q99999 423 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 TM2D1Q9BX74 207 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 ATG5Q9H1Y0 275 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 WDR13Q9H1Z4 485 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 LIME1Q9H400 295 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 HMG20AQ9NP66 347 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 DIABLOQ9NR28 239 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM106BQ9NUM4 274 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 DCAF16Q9NXF7 216 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 ST3GAL6Q9Y274 331 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 NPTNQ9Y639 398 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 CACNG2Q9Y698 323 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 DSCAMO60469 2012 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 GCN1Q92616 2671 aaKnown RBP4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 PTPN13Q12923 2485 aa4.83□□□□□ -1.64
NIFKP3-201ENST00000417799 PPIAL4EA0A075B759 164 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 A0A0A6YYD4 124 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 A0A0A6YYH2 397 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TRAV38-1A0A0B4J264 116 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 OOEPA6NGQ2 149 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 A6NJ64 397 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 LYNX1G3V0Z9 82 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 LGALS8O00214 317 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SH2D1BO14796 132 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 GEMIN2O14893 280 aaKnown RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 DEGS1O15121 323 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SOCS1O15524 211 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 RP2O75695 350 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SCGNO76038 276 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 LY6HO94772 140 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 IGHV4-39P01824 125 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PPIAL4FP0DN26 164 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 LYNX1P0DP58 116 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PAX1P15863 534 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 MUC1P15941 1255 aaPredicted RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 GABRR1P24046 479 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 CDK2P24941 298 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 BLVRBP30043 206 aaPredicted RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 CD80P33681 288 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TALDO1P37837 337 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 ETV6P41212 452 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SNU13P55769 128 aaKnown RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM50BP56557 158 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM33P57088 247 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF146Q15072 292 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TAF9Q16594 264 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 MICBQ29980 383 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 VWC2Q2TAL6 325 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PIGYQ3MUY2 71 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 MOGAT2Q3SYC2 334 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SPANXN2Q5MJ10 180 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 TEX36Q5VZQ5 186 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 Q6P435 159 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 CNIH2Q6PI25 160 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 METAP1DQ6UB28 335 aaPredicted RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 LINC00596Q86U02 117 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 OR4M1Q8NGD0 313 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 OR56B1Q8NGI3 324 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 OR5M8Q8NGP6 311 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 OR10R2Q8NGX6 335 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms