RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 PTPN13Q12923 2485 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 TRAV39A0A0B4J263 110 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 TRAV38-1A0A0B4J264 116 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 PIGBOS1A0A0B4J2F0 54 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 IGKV1-6A0A0C4DH72 117 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 C13orf42A0A1B0GVH6 325 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ODAMA1E959 279 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 DEFB108AA8MXU0 73 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 C12orf77C9JDV5 145 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 K7N7A8 449 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 LGALS8O00214 317 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 GPR31O00270 319 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 MPPED1O15442 326 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ZG16O60844 167 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ZNF737O75373 536 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 CYB5R3P00387 301 aaPredicted RBP5.54□□□□□ -1.52
HDAC8-211ENST00000415409 HBZP02008 142 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 TFF1P04155 84 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 GZMHP20718 246 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 CEACAM6P40199 344 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 UQCRFS1P47985 274 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 GLIPR1P48060 266 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 P2RX3P56373 397 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 H2BFSP57053 126 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 RND3P61587 244 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 SRPXP78539 464 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 HOXA4Q00056 320 aaPredicted RBP5.54□□□□□ -1.52
HDAC8-211ENST00000415409 SRSF4Q08170 494 aaKnown RBP5.54□□□□□ -1.52
HDAC8-211ENST00000415409 EDDM3AQ14507 147 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 HERPUD1Q15011 391 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 CDSNQ15517 529 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ANKRD55Q3KP44 614 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 PHLDA2Q53GA4 152 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 LY6G6FQ5SQ64 297 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 STUMQ69YW2 141 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 MUC15Q8N387 334 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ZBTB8BQ8NAP8 495 aaPredicted RBP5.54□□□□□ -1.52
HDAC8-211ENST00000415409 DEFB108BQ8NET1 73 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 OR10V1Q8NGI7 309 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 MRGPRDQ8TDS7 321 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ITLN2Q8WWU7 325 aaPredicted RBP5.54□□□□□ -1.52
HDAC8-211ENST00000415409 GALNT14Q96FL9 552 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 COQ2Q96H96 371 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 TMEM204Q9BSN7 226 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 SHARPINQ9H0F6 387 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 FAM234AQ9H0X4 552 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 NCOR1P1Q9H4R4 102 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 ZNF665Q9H7R5 613 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 SLC2A9Q9NRM0 540 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 TMEM106BQ9NUM4 274 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 PPP1R14DQ9NXH3 145 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 OR6C3Q9NZP0 311 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 OPN4Q9UHM6 478 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 HSPB11Q9Y547 144 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 FREM1Q5H8C1 2179 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 BSNQ9UPA5 3926 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 MED12LQ86YW9 2145 aa5.54□□□□□ -1.52
HDAC8-211ENST00000415409 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 DOCK7Q96N67 2140 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PPIAL4EA0A075B759 164 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 IGHV1-69-2A0A0G2JMI3 117 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 C3orf85A0A1B0GTC6 90 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 DBX1A6NMT0 343 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 HMSDA8MTL9 139 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PPIAL4DF5H284 164 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 TMEM178BH3BS89 294 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 CCSO14618 274 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 HSD17B6O14756 317 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 SIGLEC5O15389 551 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PHF1O43189 567 aaPredicted RBP5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PLAUP00749 431 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 CD8AP01732 235 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 GYPAP02724 150 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 HEXAP06865 529 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PPIAL4FP0DN26 164 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 GNRHRP30968 328 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 PPOXP50336 477 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 EDDM3BP56851 147 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 SUPT4H1P63272 117 aaKnown RBP5.53□□□□□ -1.52
HDAC8-211ENST00000415409 RELQ04864 619 aaPredicted RBP5.53□□□□□ -1.52
HDAC8-211ENST00000415409 TMEM187Q14656 261 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 MST1LQ2TV78 715 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 SMUG1Q53HV7 270 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 FAM201AQ5SY85 155 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 DCAF12L2Q5VW00 463 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 THOC7Q6I9Y2 204 aaKnown RBP5.53□□□□□ -1.52
HDAC8-211ENST00000415409 C5orf24Q7Z6I8 188 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 LGI3Q8N145 548 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 ZCCHC24Q8N2G6 241 aaKnown RBP5.53□□□□□ -1.52
HDAC8-211ENST00000415409 C9orf62Q8N4C0 152 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 OR1L1Q8NH94 360 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 THAP6Q8TBB0 222 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 CCL17Q92583 94 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 ARL11Q969Q4 196 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 C14orf79Q96F83 325 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 SEC22AQ96IW7 307 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 AKR1E2Q96JD6 320 aa5.53□□□□□ -1.52
HDAC8-211ENST00000415409 C2orf50Q96LR7 162 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms