RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 AIREO43918 545 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 PEX14O75381 377 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 IGHV3-43DP0DP04 118 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 KIR2DS4P43632 304 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 SCAND1P57086 179 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 LOXL3P58215 753 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 RELBQ01201 579 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 MXD1Q05195 221 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 LDLRAD2Q5SZI1 272 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 SFXN4Q6P4A7 337 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 OR10R2Q8NGX6 335 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 LINC01006Q8NI28 216 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 UBALD1Q8TB05 177 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 ARHGAP5-AS1Q96IT6 56 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 PECRQ9BY49 303 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 C12orf4Q9NQ89 552 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 AK3Q9UIJ7 227 aa11.85□□□□□ -0.51
CHD1-202ENST00000414220 A0A0A6YYD4 124 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 TRBV6-6A0A0A6YYG2 114 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 TXNL1O43396 289 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 NAPSAO96009 420 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
CHD1-202ENST00000414220 TALDO1P37837 337 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 TMEM50BP56557 158 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 HMGN3Q15651 99 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 OR10V1Q8NGI7 309 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 SGMS2Q8NHU3 365 aa11.84□□□□□ -0.51
CHD1-202ENST00000414220 A0A1W2PPE3 182 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 SMIM30A4D0T7 59 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 M0QZK8 103 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 HSD17B6O14756 317 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 HSPA12AO43301 675 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 YPEL1O60688 119 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 SLC2A2P11168 524 aaPredicted RBP11.83□□□□□ -0.52
CHD1-202ENST00000414220 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
CHD1-202ENST00000414220 ARFRP1Q13795 201 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 HES1Q14469 280 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 MORN2Q502X0 79 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 LY6G6FQ5SQ64 297 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 MOB3BQ86TA1 216 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 IL1F10Q8WWZ1 152 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHD1-202ENST00000414220 YPEL2Q96QA6 119 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 ETV7Q9Y603 341 aa11.83□□□□□ -0.52
CHD1-202ENST00000414220 A0A075B6Q4 140 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 FOXI3A8MTJ6 420 aaPredicted RBP11.82□□□□□ -0.52
CHD1-202ENST00000414220 ZBTB25P24278 435 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 KIR2DS1Q14954 304 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 IDNKQ5T6J7 187 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
CHD1-202ENST00000414220 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 OR2AK2Q8NG84 335 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 OR52L2PQ8NGH6 319 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 SLC25A33Q9BSK2 321 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 ABHD14AQ9BUJ0 271 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 GHITMQ9H3K2 345 aa11.82□□□□□ -0.52
CHD1-202ENST00000414220 TRIM64CA6NLI5 447 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 RAB27BO00194 218 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 TIMM23O14925 209 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 OR2F2O95006 317 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 HIST1H1DP16402 221 aaKnown RBP11.81□□□□□ -0.52
CHD1-202ENST00000414220 SERPINB10P48595 397 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 EFNB2P52799 333 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 HLA-DRB3P79483 266 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 PLAC9Q5JTB6 97 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 CCBE1Q6UXH8 406 aaPredicted RBP11.81□□□□□ -0.52
CHD1-202ENST00000414220 NR2C2APQ86WQ0 139 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 DRAM1Q8N682 238 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 OR56B4Q8NH76 319 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 EDARADDQ8WWZ3 215 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 YIPF6Q96EC8 236 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 RBM14Q96PK6 669 aaKnown RBP11.81□□□□□ -0.52
CHD1-202ENST00000414220 Q9N2K0 584 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 PIPOXQ9P0Z9 390 aa11.81□□□□□ -0.52
CHD1-202ENST00000414220 A0A0B4J203 849 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 IGHV1-3A0A0C4DH29 117 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 CHST1O43916 411 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 SNRPBP14678 240 aaKnown RBP11.8□□□□□ -0.52
CHD1-202ENST00000414220 GNB3P16520 340 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 TMEM11P17152 192 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 CD24P25063 80 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
CHD1-202ENST00000414220 PITPNAQ00169 270 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 CT45A1Q5HYN5 189 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 UTF1Q5T230 341 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 ZNF439Q8NDP4 499 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 OR2T10Q8NGZ9 312 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 CT45A3Q8NHU0 189 aa11.8□□□□□ -0.52
CHD1-202ENST00000414220 RTN4IP1Q8WWV3 396 aaPredicted RBP11.8□□□□□ -0.52
CHD1-202ENST00000414220 WFDC12Q8WWY7 111 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms