RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PALMDQ9NP74 551 aa9.38□□□□□ -0.91
LIMS2-210ENST00000413578 TMEM138Q9NPI0 162 aa9.38□□□□□ -0.91
LIMS2-210ENST00000413578 CHCHD3Q9NX63 227 aaKnown RBP9.38□□□□□ -0.91
LIMS2-210ENST00000413578 GNG12Q9UBI6 72 aa9.38□□□□□ -0.91
LIMS2-210ENST00000413578 GMPPBQ9Y5P6 360 aa9.38□□□□□ -0.91
LIMS2-210ENST00000413578 A8MZ25 164 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 LINC01619G3V211 115 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 SPINT2O43291 252 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 NDUFA3O95167 84 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 CSTBP04080 98 aaKnown RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 SERPINA2P20848 420 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 BLVRBP30043 206 aaPredicted RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 VEGFCP49767 419 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 GBX2P52951 348 aaPredicted RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 DOC2BQ14184 412 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 C5orf64Q2M2E5 130 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 SYT6Q5T7P8 510 aaPredicted RBP9.37□□□□□ -0.91
LIMS2-210ENST00000413578 DDI2Q5TDH0 399 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 XAF1Q6GPH4 301 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 OR1L1Q8NH94 360 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 GPR148Q8TDV2 347 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 TMEM106AQ96A25 262 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 CYYR1Q96J86 154 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 NABP2Q9BQ15 211 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ANKRD60Q9BZ19 345 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 C19orf73Q9NVV2 129 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ING4Q9UNL4 249 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 FBXO7Q9Y3I1 522 aa9.37□□□□□ -0.91
LIMS2-210ENST00000413578 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 A0A087WW49 117 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 SNTNA6NMZ2 147 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 LDLRAD4O15165 306 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 NBR2O15453 112 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 SC5DO75845 299 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 FADS2O95864 444 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 LGALS1P09382 135 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 OR8U9P0C7N5 309 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 GTF2F2P13984 249 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 IGFBP3P17936 291 aaPredicted RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 RCC1P18754 421 aaPredicted RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 ADARB1P78563 741 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 RAB40BQ12829 278 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 SLC22A6Q4U2R8 563 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 MORN2Q502X0 79 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 OR6Q1Q8NGQ2 317 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 OR4K15Q8NH41 348 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 RHOXF1Q8NHV9 184 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 ORAI1Q96D31 301 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 MRPL20Q9BYC9 149 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 SPACA1Q9HBV2 294 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 AMBNQ9NP70 447 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
LIMS2-210ENST00000413578 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 MRPS18AQ9NVS2 196 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 PAK1IP1Q9NWT1 392 aaPredicted RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 MRPS28Q9Y2Q9 187 aaKnown RBP9.36□□□□□ -0.91
LIMS2-210ENST00000413578 EI24O14681 340 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 CD2P06729 351 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
LIMS2-210ENST00000413578 BDKRB2P30411 391 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 GNMTQ14749 295 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
LIMS2-210ENST00000413578 CCDC58Q4VC31 144 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 C1orf146Q5VVC0 180 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 RPL22L1Q6P5R6 122 aaKnown RBP9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ADAMTSL5Q6ZMM2 481 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 LYPD6Q86Y78 171 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 STX19Q8N4C7 294 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 OR52I1Q8NGK6 324 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 NEK7Q8TDX7 302 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ISOC1Q96CN7 298 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ABHD14AQ9BUJ0 271 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 ETAA1Q9NY74 926 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 TRAPPC2LQ9UL33 140 aa9.35□□□□□ -0.91
LIMS2-210ENST00000413578 TRBV5-5A0A0J9YX44 114 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 MCRIP1C9JLW8 97 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 CA11O75493 328 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 GPX5O75715 221 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 IGLV1-51P01701 117 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 ALDH3A2P51648 485 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 PPP3R1P63098 170 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 SRSF7Q16629 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
LIMS2-210ENST00000413578 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
LIMS2-210ENST00000413578 SIGIRRQ6IA17 410 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms