RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 OPALINQ96PE5 141 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 ALG8Q9BVK2 526 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 TMED9Q9BVK6 235 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 JAM3Q9BX67 310 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 TOLLIPQ9H0E2 274 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 ISG20L2Q9H9L3 353 aaKnown RBP4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 NEK6Q9HC98 313 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 PLCXD1Q9NUJ7 323 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 ERGIC3Q9Y282 383 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 LYSTQ99698 3801 aa4.62□□□□□ -1.67
HMGN1P20-201ENST00000411849 IGHV4OR15-8A0A075B7B6 117 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 A0A087WW49 117 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 FAM90A10PA6NDY2 464 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 C12orf77C9JDV5 145 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 E9PI62 339 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 G3V318 75 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 H0Y980 276 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 HTR1AP08908 422 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 UBCP0CG48 685 aaKnown RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 SLC2A2P11168 524 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 ZNF20P17024 532 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 SSTR5P35346 364 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 KCNJ3P48549 501 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 ETV1P50549 477 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 PAX5Q02548 391 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 PAN3Q58A45 887 aaKnown RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 TMEM244Q5VVB8 128 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 RNLSQ5VYX0 342 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 FAM53AQ6NSI3 398 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 Q6P435 159 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 UTS2BQ765I0 119 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 C8orf59Q8N0T1 100 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 LINC00311Q8N616 119 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 OR52M1Q8NGK5 317 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 RFESDQ8TAC1 157 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 MRGPRDQ8TDS7 321 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 SPSB1Q96BD6 273 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 MRPL48Q96GC5 212 aaKnown RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 C4orf36Q96KX1 117 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 MYCBPQ99417 103 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 RSRP1Q9BUV0 290 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 ALX4Q9H161 411 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 ZCCHC4Q9H5U6 513 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 PARP11Q9NR21 331 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 DIMT1Q9UNQ2 313 aaKnown RBP4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 WSB1Q9Y6I7 421 aa4.61□□□□□ -1.67
HMGN1P20-201ENST00000411849 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 IGKV1-9A0A0C4DH69 117 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 IGKV1-12A0A0C4DH73 117 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 LOC107986453A0A1B0GWG9 222 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 SHISA3A0PJX4 238 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 IRGMA1A4Y4 181 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 SDCBPO00560 298 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HSPB6O14558 160 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 ATP6V0E1O15342 81 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 OGG1O15527 345 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 IGKV1D-12P01611 117 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HLA-DRB1P01911 266 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CSTBP04080 98 aaKnown RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HSPB1P04792 205 aaKnown RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 ATF1P18846 271 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 GZMHP20718 246 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 GTF2A1P52655 376 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 GBX2P52951 348 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 F2RL1P55085 397 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 AQP4P55087 323 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 ST3GAL4Q11206 333 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 MRPL28Q13084 256 aaKnown RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 RIPK1Q13546 671 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CDK5R1Q15078 307 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 MMDQ15546 238 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 Q3ZCU0 254 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 PYHIN1Q6K0P9 492 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HAPLN4Q86UW8 402 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 TCTEX1D1Q8N7M0 179 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 MINDY2Q8NBR6 621 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 ZNF485Q8NCK3 441 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 OR51A4Q8NGJ6 313 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 OR10AC1Q8NH08 325 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 FGGYQ96C11 551 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 ADAT3Q96EY9 351 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 TMEM80Q96HE8 168 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 PDCD1LG2Q9BQ51 273 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 FAM110AQ9BQ89 295 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CST11Q9H112 138 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HIPK2Q9H2X6 1198 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 VCXQ9H320 206 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 RETNQ9HD89 108 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 FKBP14Q9NWM8 211 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CNOT2Q9NZN8 540 aaKnown RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CLEC2DQ9UHP7 191 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 PSORS1C1Q9UIG5 152 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 EXOSC1Q9Y3B2 195 aaKnown RBP4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 CEPT1Q9Y6K0 416 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 DNAH7Q8WXX0 4024 aa4.6□□□□□ -1.67
HMGN1P20-201ENST00000411849 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.67
HMGN1P20-201ENST00000411849 NUPR2A6NF83 97 aa4.59□□□□□ -1.67
HMGN1P20-201ENST00000411849 EFCAB10A6NFE3 127 aa4.59□□□□□ -1.67
HMGN1P20-201ENST00000411849 TMEM212A6NML5 194 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms