RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 POLDIP2Q9Y2S7 368 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 MYH7BA7E2Y1 1941 aa-2.39□□□□□ -2.79
RNU4-88P-201ENST00000411220 FRMPD4Q14CM0 1322 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 DNMBPQ6XZF7 1577 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRAV10A0A0B4J240 114 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRAV38-1A0A0B4J264 116 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 EIF3CLB5ME19 914 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 J3KTA2 159 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 EI24O14681 340 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SLC30A4O14863 429 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 KPNA5O15131 536 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 RGS5O15539 181 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CXCL13O43927 109 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SSX4O60224 188 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 RAMP1O60894 148 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDCD6O75340 191 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 MED24O75448 989 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TCL1BO95988 128 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CA1P00915 261 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 GYPCP04921 128 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CD3GP09693 182 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 METTL15P1P0C7V9 234 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SPART-AS1P0CW21 52 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SRGAP2BP0DMP2 458 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 COX7CP15954 63 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NPPBP16860 134 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SERPINA2P20848 420 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 IL32P24001 234 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NAA10P41227 235 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SSR2P43308 183 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 GMPSP49915 693 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SULT1A2P50226 295 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PPP1CAP62136 330 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 KLRB1Q12918 225 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 DCTN2Q13561 401 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDK3Q15120 406 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NSUN5P1Q3KNT7 163 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TBRG1Q3YBR2 411 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 MRPL51Q4U2R6 128 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TP53I3Q53FA7 332 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 IFI44LQ53G44 452 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CT45A1Q5HYN5 189 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 ZNF826PQ6ZT77 177 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 FRMD1Q8N878 549 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CAMKVQ8NCB2 501 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR11H1Q8NG94 326 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR13C5Q8NGS8 318 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PIH1D2Q8WWB5 315 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 GHSRQ92847 366 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 GALMQ96C23 342 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMA16Q96EY4 203 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CABS1Q96KC9 395 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SFXN2Q96NB2 322 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 METTL26Q96S19 204 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PIGSQ96S52 555 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NPY6RQ99463 290 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NDNQ99608 321 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 MGLLQ99685 303 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 CCM2Q9BSQ5 444 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 ALKBH7Q9BT30 221 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 SAMD10Q9BYL1 202 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 ULBP3Q9BZM4 244 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 DPAGT1Q9H3H5 408 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 TCEAL2Q9H3H9 227 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 RIBC2Q9H4K1 309 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 STN1Q9H668 368 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 ASB7Q9H672 318 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 RPF1Q9H9Y2 349 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NSMCE4AQ9NXX6 385 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 B3GNT2Q9NY97 397 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 C9orf78Q9NZ63 289 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 AASSQ9UDR5 926 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 XPO7Q9UIA9 1087 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PACSIN2Q9UNF0 486 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 DIMT1Q9UNQ2 313 aaKnown RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NME7Q9Y5B8 376 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 PHLDA3Q9Y5J5 127 aa-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 NUP210Q8TEM1 1887 aaPredicted RBP-2.4□□□□□ -2.79
RNU4-88P-201ENST00000411220 ELP1O95163 1332 aa-2.41□□□□□ -2.79
RNU4-88P-201ENST00000411220 TTC41PQ6P2S7 1318 aa-2.41□□□□□ -2.79
RNU4-88P-201ENST00000411220 KDM6AO15550 1401 aaPredicted RBP-2.41□□□□□ -2.79
RNU4-88P-201ENST00000411220 MYOM3Q5VTT5 1437 aa-2.41□□□□□ -2.79
RNU4-88P-201ENST00000411220 ANKRD31Q8N7Z5 1873 aa-2.41□□□□□ -2.79
RNU4-88P-201ENST00000411220 TRAV7A0A075B6U4 112 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV2OR16-5A0A0B4J2B6 119 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM238C9JI98 176 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PDLIM1O00151 329 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 TSPAN2O60636 221 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CTNSO60931 367 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PPBPP02775 128 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDK1P06493 297 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACTN1P12814 892 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GTF2F2P13984 249 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 MIFP14174 115 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCNB1P14635 433 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAB3AP20336 220 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAB3BP20337 219 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 KLRK1P26718 216 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 PSMB6P28072 239 aa-2.41□□□□□ -2.8
RNU4-88P-201ENST00000411220 GNRHRP30968 328 aa-2.41□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms