RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ELF5Q9UKW6 265 aaPredicted RBP19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 AMMECR1Q9Y4X0 333 aaPredicted RBP19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 CD3GP09693 182 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 HKR1P10072 659 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 CEACAM3P40198 252 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 MRPS15P82914 257 aaKnown RBP19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 TMEM30BQ3MIR4 351 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 IL1F10Q8WWZ1 152 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 GALMQ96C23 342 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 Q9N2K0 584 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 ABRACLQ9P1F3 81 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 SPATA2Q9UM82 520 aa19.23■□□□□ 0.67
UBE2E3-202ENST00000410062 DNHD1Q96M86 4753 aa19.22■□□□□ 0.67
UBE2E3-202ENST00000410062 TMEM89A2RUT3 159 aa19.22■□□□□ 0.67
UBE2E3-202ENST00000410062 SLC31A2O15432 143 aa19.22■□□□□ 0.67
UBE2E3-202ENST00000410062 TMEM127O75204 238 aa19.22■□□□□ 0.67
UBE2E3-202ENST00000410062 CRYBA1P05813 215 aa19.22■□□□□ 0.67
UBE2E3-202ENST00000410062 SERPINE3A8MV23 424 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 PPP1CCP36873 323 aaKnown RBP19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 ZNF134P52741 427 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 HTD2P86397 168 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 MADCAM1Q13477 382 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 DIAPH2-AS1Q14236 149 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 CDNFQ49AH0 187 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 ZNF439Q8NDP4 499 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 RPEQ96AT9 228 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 JPT1Q9UK76 154 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 STAB1Q9NY15 2570 aa19.21■□□□□ 0.67
UBE2E3-202ENST00000410062 HLA-DRB3P79483 266 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 ARFRP1Q13795 201 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 MORN2Q502X0 79 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 LINC00311Q8N616 119 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 C8orf31Q8N9H6 132 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 TOMM40LQ969M1 308 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 C1RLQ9NZP8 487 aa19.2■□□□□ 0.66
UBE2E3-202ENST00000410062 SCGNO76038 276 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 FCGR3AP08637 254 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 SCTP09683 121 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 RPL5P46777 297 aaKnown RBP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 DYNLT3P51808 116 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 RELBQ01201 579 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 Q3ZCU0 254 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 CT45A1Q5HYN5 189 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 CLVS1Q8IUQ0 354 aaPredicted RBP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 CT45A3Q8NHU0 189 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 PHF21AQ96BD5 680 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 OCSTAMPQ9BR26 566 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 ZNF230Q9UIE0 474 aaPredicted RBP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 MGAT4AQ9UM21 535 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 TENM1Q9UKZ4 2725 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 POM121CA8CG34 1229 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 CD24P25063 80 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 ARL6IP1Q15041 203 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 CCBE1Q6UXH8 406 aaPredicted RBP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 SLC25A48Q6ZT89 311 aaKnown RBP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 IZUMO1Q8IYV9 350 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 MAFIPQ8WZ33 124 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 DCSTAMPQ9H295 470 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 TCF19Q9Y242 345 aa19.19■□□□□ 0.66
UBE2E3-202ENST00000410062 TMEM235A6NFC5 223 aa19.18■□□□□ 0.66
UBE2E3-202ENST00000410062 ZNF260Q3ZCT1 412 aa19.18■□□□□ 0.66
UBE2E3-202ENST00000410062 DHRS7BQ6IAN0 325 aaPredicted RBP19.18■□□□□ 0.66
UBE2E3-202ENST00000410062 TMEM219Q86XT9 240 aa19.18■□□□□ 0.66
UBE2E3-202ENST00000410062 SPATA3Q8NHX4 192 aa19.18■□□□□ 0.66
UBE2E3-202ENST00000410062 OOSP1A8MZH6 123 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 TRDCB7Z8K6 153 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 CHST1O43916 411 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 YPEL1O60688 119 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 TALDO1P37837 337 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 REG1BP48304 166 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 ARHGDIBP52566 201 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 RPL15P61313 204 aaKnown RBP19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 HACD4Q5VWC8 232 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 CCDC144NLQ6NUI1 221 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 SAMD12Q8N8I0 201 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 YPEL2Q96QA6 119 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 SLC23A1Q9UHI7 598 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 SCOCQ9UIL1 159 aa19.17■□□□□ 0.66
UBE2E3-202ENST00000410062 TRAV18A0A075B6X5 111 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 A6NDX4 124 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 HSD17B6O14756 317 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 GSTP1P09211 210 aaKnown RBP19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 BRS3P32247 399 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 MNDAP41218 407 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 RORCP51449 518 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 AWAT1Q58HT5 328 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 UBE2NLQ5JXB2 153 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 STEAP3Q658P3 488 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 NUDCD2Q8WVJ2 157 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 KCTD12Q96CX2 325 aaKnown RBP19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 ABHD14AQ9BUJ0 271 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 OR1A1Q9P1Q5 309 aa19.16■□□□□ 0.66
UBE2E3-202ENST00000410062 A0A1W2PPI3 338 aa19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 RGS11O94810 467 aa19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 COMPP49747 757 aaPredicted RBP19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 RAB7AP51149 207 aa19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 RAG2P55895 527 aa19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 FOXL1Q12952 345 aa19.15■□□□□ 0.66
UBE2E3-202ENST00000410062 FBLN7Q53RD9 439 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms