RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 LOC100506127A0A0U1RQW1 187 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 SMIM30A4D0T7 59 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 EFNB2P52799 333 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 HTD2P86397 168 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 HMGN3Q15651 99 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 C16orf82Q7Z2V1 217 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 OR8H3Q8N146 312 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 ZNF439Q8NDP4 499 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 PECRQ9BY49 303 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 OR2S2Q9NQN1 319 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 JPT1Q9UK76 154 aa16.66■□□□□ 0.26
VSX1-204ENST00000409958 A0A0B4J203 849 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 TRIM64CA6NLI5 447 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 SLC2A2P11168 524 aaPredicted RBP16.65■□□□□ 0.26
VSX1-204ENST00000409958 SDC2P34741 201 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 DIAPH2-AS1Q14236 149 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 TIMM50Q3ZCQ8 353 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 PLAC9Q5JTB6 97 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 STEAP3Q658P3 488 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 Q6ZPA2 131 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 SLC25A48Q6ZT89 311 aaKnown RBP16.65■□□□□ 0.26
VSX1-204ENST00000409958 OR10V1Q8NGI7 309 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 GALMQ96C23 342 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 ABRACLQ9P1F3 81 aa16.65■□□□□ 0.26
VSX1-204ENST00000409958 A0A1W2PPI3 338 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 CD24P25063 80 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 IL3RAP26951 378 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 ZNF816Q0VGE8 651 aaPredicted RBP16.64■□□□□ 0.25
VSX1-204ENST00000409958 MORN2Q502X0 79 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 SFXN4Q6P4A7 337 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 THNSL2Q86YJ6 484 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 OR2T6Q8NHC8 308 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 RAB3CQ96E17 227 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 CENPOQ9BU64 300 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 RNF167Q9H6Y7 350 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 C12orf4Q9NQ89 552 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 MGAT4AQ9UM21 535 aa16.64■□□□□ 0.25
VSX1-204ENST00000409958 METTL21EPA6NDL7 271 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 FAM90A9PA6NNJ1 464 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 HSD17B6O14756 317 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 TIMM23O14925 209 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 SLC31A2O15432 143 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 GAPDHP04406 335 aaKnown RBP16.63■□□□□ 0.25
VSX1-204ENST00000409958 FAM106CPP0CH98 169 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 ZNF134P52741 427 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 MOGAT2Q3SYC2 334 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 CT45A1Q5HYN5 189 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 LY6G6FQ5SQ64 297 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 C11orf88Q6PI97 169 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 C5orf24Q7Z6I8 188 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 Q8N2B8 174 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 OR52L2PQ8NGH6 319 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 OR10R2Q8NGX6 335 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 CT45A3Q8NHU0 189 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 SGMS2Q8NHU3 365 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 SETD6Q8TBK2 473 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 CFHR4Q92496 578 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 ST6GALNAC6Q969X2 333 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 YIPF6Q96EC8 236 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 AKR1E2Q96JD6 320 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 CMSS1Q9BQ75 279 aaKnown RBP16.63■□□□□ 0.25
VSX1-204ENST00000409958 HDHD3Q9BSH5 251 aaPredicted RBP16.63■□□□□ 0.25
VSX1-204ENST00000409958 ZNF702PQ9H963 129 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 DAPK2Q9UIK4 370 aa16.63■□□□□ 0.25
VSX1-204ENST00000409958 RAB27BO00194 218 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 YPEL1O60688 119 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 RGS11O94810 467 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 OR2F2O95006 317 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 ZNF137PP52743 207 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 MXD1Q05195 221 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 GNMTQ14749 295 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 DRAM1Q8N682 238 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 OR56B4Q8NH76 319 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 CAPSLQ8WWF8 208 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 RBM14Q96PK6 669 aaKnown RBP16.62■□□□□ 0.25
VSX1-204ENST00000409958 YPEL2Q96QA6 119 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 CITED1Q99966 193 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 PRSS22Q9GZN4 317 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 KCNK7Q9Y2U2 307 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 SIGLEC9Q9Y336 463 aa16.62■□□□□ 0.25
VSX1-204ENST00000409958 CLEC2LP0C7M8 214 aa16.61■□□□□ 0.25
VSX1-204ENST00000409958 PPP1CCP36873 323 aaKnown RBP16.61■□□□□ 0.25
VSX1-204ENST00000409958 KRTAP10-3P60369 221 aa16.61■□□□□ 0.25
VSX1-204ENST00000409958 SRSF4Q08170 494 aaKnown RBP16.61■□□□□ 0.25
VSX1-204ENST00000409958 HABP2Q14520 560 aaPredicted RBP16.61■□□□□ 0.25
VSX1-204ENST00000409958 SLC25A33Q9BSK2 321 aa16.61■□□□□ 0.25
VSX1-204ENST00000409958 Q9N2K0 584 aa16.61■□□□□ 0.25
VSX1-204ENST00000409958 IGHV1-3A0A0C4DH29 117 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 MFNGO00587 321 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 AIREO43918 545 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 LPLP06858 475 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 SNRNP70P08621 437 aaKnown RBP16.6■□□□□ 0.25
VSX1-204ENST00000409958 BLCAPP62952 87 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 HLA-DRB3P79483 266 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 FBLN7Q53RD9 439 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
VSX1-204ENST00000409958 IL1F10Q8WWZ1 152 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 ABHD14AQ9BUJ0 271 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 ATG5Q9H1Y0 275 aa16.6■□□□□ 0.25
VSX1-204ENST00000409958 TXNL1O43396 289 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms