RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CA6P23280 308 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ERVFRD-1P60508 538 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 TMEM267Q0VDI3 215 aaPredicted RBP8.32□□□□□ -1.08
MSH2-202ENST00000406134 OR2T2Q6IF00 324 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 Q6ZR03 302 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 C1QL4Q86Z23 238 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 FAM58AQ8N1B3 248 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 APH1AQ96BI3 265 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 WDYHV1Q96HA8 205 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ZPBPQ9BS86 351 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 PKIBQ9C010 78 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 MBNL3Q9NUK0 354 aaKnown RBP8.32□□□□□ -1.08
MSH2-202ENST00000406134 ATMQ13315 3056 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 DMXL2Q8TDJ6 3036 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 KIR2DS1A0A191URI9 304 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 H3BP45 60 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 PRH1P02810 166 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 SELEP16581 610 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 KIR2DS4P43632 304 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 KIR2DS1Q14954 304 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 EIF2S3LQ2VIR3 472 aaKnown RBP8.31□□□□□ -1.08
MSH2-202ENST00000406134 FAM90A2PQ658T7 463 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 VASH2Q86V25 355 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 CYB561D1Q8N8Q1 229 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 RAB39BQ96DA2 213 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 ERRFI1Q9UJM3 462 aaPredicted RBP8.31□□□□□ -1.08
MSH2-202ENST00000406134 PRR14LQ5THK1 2151 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 H3BQ15 152 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 CDX4O14627 284 aaPredicted RBP8.31□□□□□ -1.08
MSH2-202ENST00000406134 GATCO43716 136 aaKnown RBP8.31□□□□□ -1.08
MSH2-202ENST00000406134 ELOBQ15370 118 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 ATP1A1-AS1Q5TC04 95 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 LINC00696Q6ZRV3 163 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 LFNGQ8NES3 379 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 OR1J1Q8NGS3 322 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 SMDT1Q9H4I9 107 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 CLN5O75503 358 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 ARR3P36575 388 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 MEOX1P50221 254 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 TAS2R30P59541 319 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 Q8WTZ3 238 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 RSG1Q9BU20 258 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 MPC1Q9Y5U8 109 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 HCFC1P51610 2035 aa8.31□□□□□ -1.08
MSH2-202ENST00000406134 M0R036 132 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SMPD2O60906 423 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR2H2O95918 312 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SP1P08047 785 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 C11orf53Q8IXP5 236 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 ZNF561Q8N587 486 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 ZNF525Q8N782 197 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SCCPDHQ8NBX0 429 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR51H1Q8NH63 302 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 UBALD1Q8TB05 177 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 HES4Q9HCC6 221 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 TRAV1-1A0A0B4J248 108 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 A0A1B0GU03 582 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR5B21A6NL26 309 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 PCP4P48539 62 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 RAB5BP61020 215 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 GNG3P63215 75 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 FABP9Q0Z7S8 132 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR8G1Q15617 311 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 KRBOX4Q5JUW0 171 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 PLA2G2CQ5R387 149 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 CA5BP1Q8WTZ4 195 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SPIN2AQ99865 258 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SPIN2BQ9BPZ2 258 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 TREM2Q9NZC2 230 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR14J1Q9UGF5 321 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 WIPI2Q9Y4P8 454 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 AHCTF1Q8WYP5 2266 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 USF3Q68DE3 2245 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 LOC102723971A0A1B0GUV8 181 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 IGKV1D-33P01593 117 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 IGKV1-33P01594 117 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 CTXN2P0C2S0 81 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 MPLP40238 635 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 OR10V1Q8NGI7 309 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 ARRDC1-AS1Q9H2J1 176 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 KCNJ16Q9NPI9 418 aa8.3□□□□□ -1.08
MSH2-202ENST00000406134 PUS1Q9Y606 427 aaKnown RBP eCLIP8.3□□□□□ -1.08
MSH2-202ENST00000406134 RAI1Q7Z5J4 1906 aaPredicted RBP8.3□□□□□ -1.08
MSH2-202ENST00000406134 CNOT1A5YKK6 2376 aaKnown RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 J3QT63 122 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 DEGS1O15121 323 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 PSPNO60542 156 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 HSPB1P04792 205 aaKnown RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 PGA5P0DJD9 388 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 CEBPDP49716 269 aaPredicted RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 ZNF146Q15072 292 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 OR10J5Q8NHC4 309 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms