RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 OLFML2AQ68BL7 652 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 ZNF880Q6PDB4 577 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 IZUMO1Q8IYV9 350 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 ABHD12Q8N2K0 398 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 PNKDQ8N490 385 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 C11orf42Q8N5U0 333 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 ZDHHC22Q8N966 263 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 ZNF596Q8TC21 504 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 IL1F10Q8WWZ1 152 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 TNFRSF14Q92956 283 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 DIRAS2Q96HU8 199 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 SLC6A7Q99884 636 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 HDHD3Q9BSH5 251 aaPredicted RBP8.6□□□□□ -1.03
RPAIN-204ENST00000405578 ST6GALNAC5Q9BVH7 336 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 Q9N2K0 584 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 IFT46Q9NQC8 304 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 EXTL2Q9UBQ6 330 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 A0A087X0M5 115 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 IGHV2-26A0A0B4J1V2 119 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 A0A1B0GX30 115 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 RNASEK-C17orf49H0YIS7 233 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 C15orf65H3BRN8 121 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 CTDSP2O14595 271 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 NPFFO15130 113 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 FSHBP01225 129 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 ARG1P05089 322 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 CTXN2P0C2S0 81 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 HKR1P10072 659 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 CD34P28906 385 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 UBA52P62987 128 aaKnown RBP8.59□□□□□ -1.03
RPAIN-204ENST00000405578 HMGN3Q15651 99 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 Q3ZCU0 254 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 KLF17Q5JT82 389 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-204ENST00000405578 LAX1Q8IWV1 398 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR11H6Q8NGC7 330 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR4A4PQ8NGN8 299 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR10X1Q8NGY0 326 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR9G1Q8NH87 305 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR1L1Q8NH94 360 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 NUDCD2Q8WVJ2 157 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 NXF2Q9GZY0 626 aaKnown RBP8.59□□□□□ -1.03
RPAIN-204ENST00000405578 SCPEP1Q9HB40 452 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 OR2S2Q9NQN1 319 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 JPT1Q9UK76 154 aa8.59□□□□□ -1.03
RPAIN-204ENST00000405578 TBL2Q9Y4P3 447 aaKnown RBP8.59□□□□□ -1.03
RPAIN-204ENST00000405578 AMMECR1Q9Y4X0 333 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-204ENST00000405578 A6NHS1 94 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 SULT1C2O00338 296 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 FABP7O15540 132 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 MMP23AO75900 390 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 DIRAS3O95661 229 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 LPLP06858 475 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 FBP1P09467 338 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ZBTB25P24278 435 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 IL3RAP26951 378 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 HTR1DP28221 377 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 SAA4P35542 130 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 CEACAM3P40198 252 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ARHGDIBP52566 201 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ARPC4P59998 168 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
RPAIN-204ENST00000405578 PRB3Q04118 309 aaPredicted RBP8.58□□□□□ -1.04
RPAIN-204ENST00000405578 KLRD1Q13241 179 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 MINOS1Q5TGZ0 78 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ZNF626Q68DY1 528 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 CNIH2Q6PI25 160 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 Q6ZS49 121 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 SNX29P2Q8IUI4 249 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 DTX3Q8N9I9 347 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 BEND2Q8NDZ0 799 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 OR2AK2Q8NG84 335 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 UBALD1Q8TB05 177 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 GFOD1Q9NXC2 390 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ZNF69Q9UC07 566 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 ZNF230Q9UIE0 474 aaPredicted RBP8.58□□□□□ -1.04
RPAIN-204ENST00000405578 MINOS1-NBL1R4GNA1 71 aa8.58□□□□□ -1.04
RPAIN-204ENST00000405578 A0A1W2PRD5 423 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 A0A1W2PRF3 423 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 A0A1W2PRM7 423 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 FABP12A6NFH5 140 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 LEUTXA8MZ59 168 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 SCTP09683 121 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 IL18Q14116 193 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 SPANXN2Q5MJ10 180 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 FOXB2Q5VYV0 432 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 PYHIN1Q6K0P9 492 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 C8orf31Q8N9H6 132 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 BEST4Q8NFU0 473 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 OR10J5Q8NHC4 309 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
RPAIN-204ENST00000405578 C22orf15Q8WYQ4 148 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms