RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 IGKV2-24A0A0C4DH68 120 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 GMNCA6NCL1 334 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 C21orf140B9A014 251 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 C4orf51C9J302 202 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 M0R036 132 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 ATP5HO75947 161 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 CALB1P05937 261 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 PTHLHP12272 177 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF7P17097 686 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 AGTR1P30556 359 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 EVI2BP34910 448 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 CD79BP40259 229 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 SULT1A2P50226 295 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 RAB2AP61019 212 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 C1DQ13901 141 aaKnown RBP1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF141Q15928 474 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 LGALSLQ3ZCW2 172 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 SPIN4Q56A73 249 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 PYDC2Q56P42 97 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 CENPWQ5EE01 88 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 LPCAT4Q643R3 524 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 TMEM215Q68D42 235 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 LRRN1Q6UXK5 716 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 BRD3OSQ6XYD6 125 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 NT5DC3Q86UY8 548 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 C10orf67Q8IYJ2 551 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR8A1Q8NGG7 326 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR5D18Q8NGL1 313 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR4A5Q8NH83 315 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 SLC37A2Q8TED4 501 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 ASB13Q8WXK3 278 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 YIPF5Q969M3 257 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 TESCQ96BS2 214 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 TAMM41Q96BW9 452 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 REEP6Q96HR9 211 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGF2BP2-AS1Q96M15 143 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 PACRGQ96M98 296 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 TIPINQ9BVW5 301 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 CDCA4Q9BXL8 241 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 MROQ9BYG7 248 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 DUSP21Q9H596 190 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 GLS2Q9UI32 602 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 GUCA1BQ9UMX6 200 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 U3KQK5 164 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 ABCC11Q96J66 1382 aa1.94□□□□□ -2.1
HMGB1P17-201ENST00000403495 CLUHO75153 1309 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 PTPRKQ15262 1439 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGHV1-45A0A0A0MS14 117 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TMEM210A6NLX4 147 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TMEM250H0YL14 139 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 H3BMM0 161 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 C15orf65H3BRN8 121 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 M0QYV0 167 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TGOLN2O43493 480 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 ARL6IP5O75915 188 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 ISG15P05161 165 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGKV4-1P06312 121 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 LINC00614P0C842 121 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 MLNP12872 115 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 GADD45AP24522 165 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 MP68P56378 58 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 STX5Q13190 355 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 BIKQ13323 160 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 PPP1R1AQ13522 171 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 GNA13Q14344 377 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 SAPCD1Q5SSQ6 148 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 CD200R1LQ6Q8B3 271 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 CCDC112Q8NEF3 446 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 MUC7Q8TAX7 377 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 HAVCR2Q8TDQ0 301 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 RAB8BQ92930 207 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR51B6Q9H340 312 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 MAP1LC3AQ9H492 121 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TAS2R9Q9NYW1 312 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TAS2R1Q9NYW7 299 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 TRAPPC1Q9Y5R8 145 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 NID2Q14112 1375 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 ADGRL1O94910 1474 aa1.93□□□□□ -2.1
HMGB1P17-201ENST00000403495 ATRNO75882 1429 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 GOLGA6L4A6NEF3 574 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 LEUTXA8MZ59 168 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 ACOX3O15254 700 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 POP7O75817 140 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 LYPLA2O95372 231 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 RPS17P08708 135 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 P0C880 135 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 CTLA4P16410 223 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF708P17019 499 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 RPS12P25398 132 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 CNTFRP26992 372 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 CRABP2P29373 138 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 RPL12P30050 165 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 FOXA1P55317 472 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 H2BFSP57053 126 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 DEFA6Q01524 100 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 IHHQ14623 411 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 BCL2A1Q16548 175 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 ACSM3Q53FZ2 586 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms