RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 HTR2CP28335 458 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 MLLT11Q13015 90 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-203ENST00000400772 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 Q8N6K4 173 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 RTN4IP1Q8WWV3 396 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-203ENST00000400772 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 RBMXL1Q96E39 390 aaKnown RBP12.57□□□□□ -0.4
ATG4B-203ENST00000400772 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-203ENST00000400772 NICN1Q9BSH3 213 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 CCDC90BQ9GZT6 254 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
ATG4B-203ENST00000400772 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 ZNF736B4DX44 427 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-203ENST00000400772 FGF16O43320 207 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 ZNF137PP52743 207 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 BEAN1Q3B7T3 259 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 TMEM30BQ3MIR4 351 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 MORN2Q502X0 79 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 Q6ZPA2 131 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 C6orf201Q7Z4U5 140 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 IZUMO1Q8IYV9 350 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 OR4F17Q8NGA8 305 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 KCNG3Q8TAE7 436 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 CNBD2Q96M20 576 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 OR4F4Q96R69 305 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 MGLLQ99685 303 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 FAAP24Q9BTP7 215 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 TMEM59Q9BXS4 323 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 OR2S2Q9NQN1 319 aa12.56□□□□□ -0.4
ATG4B-203ENST00000400772 AK6Q9Y3D8 172 aaKnown RBP12.56□□□□□ -0.4
ATG4B-203ENST00000400772 TCRBV4S1A1TA0A5B7 111 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 BPNT1O95861 308 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 CD1BP29016 333 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 HSPA13P48723 471 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 FABP5Q01469 135 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 GNMTQ14749 295 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-203ENST00000400772 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 OR6M1Q8NGM8 313 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 PLSCR3Q9NRY6 295 aa12.55□□□□□ -0.4
ATG4B-203ENST00000400772 LINC01548A6NM66 108 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 SLC17A2O00624 439 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 PSMA1P25786 263 aaKnown RBP12.54□□□□□ -0.4
ATG4B-203ENST00000400772 IL3RAP26951 378 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 HTD2P86397 168 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 P2RY14Q15391 338 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 TRAM1Q15629 374 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 HMGN3Q15651 99 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 ZNF329Q86UD4 541 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 Q8N9W7 124 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 NOL4LQ96MY1 436 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-203ENST00000400772 LPAR5Q9H1C0 372 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 KCNIP1Q9NZI2 227 aa12.54□□□□□ -0.4
ATG4B-203ENST00000400772 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-203ENST00000400772 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-203ENST00000400772 SOCS1O15524 211 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 NAPSAO96009 420 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 IGHG2P01859 326 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 BLVRBP30043 206 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-203ENST00000400772 PPP1CCP36873 323 aaKnown RBP12.53□□□□□ -0.4
ATG4B-203ENST00000400772 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-203ENST00000400772 SSX1Q16384 188 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 OXLD1Q5BKU9 147 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 ZNF880Q6PDB4 577 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 TGIF2LXQ8IUE1 241 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
ATG4B-203ENST00000400772 PSMB11A5LHX3 300 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 NCBP2LA6PVI3 153 aaKnown RBP12.52□□□□□ -0.41
ATG4B-203ENST00000400772 LANCL1O43813 399 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 YPEL1O60688 119 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 ARL6IP5O75915 188 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 MOSP00540 346 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 ARSBP15848 533 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
ATG4B-203ENST00000400772 F2RL1P55085 397 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 LY6G6FQ5SQ64 297 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 ABHD14AQ9BUJ0 271 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 PLGRKTQ9HBL7 147 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 ACOT13Q9NPJ3 140 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 PLEKHJ1Q9NW61 149 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 NOTCH3Q9UM47 2321 aa12.52□□□□□ -0.41
ATG4B-203ENST00000400772 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 LDLRAD4O15165 306 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 TXNL1O43396 289 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms