RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 NKX2-2O95096 273 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 DNAL4O96015 105 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 CYB5R3P00387 301 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 STPG2Q8N412 459 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 MPC1Q9Y5U8 109 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 LEUTXA8MZ59 168 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 PGFP49763 221 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC25A35Q3KQZ1 300 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 C12orf73Q69YU5 71 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 HIST1H4GQ99525 98 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM30AQ9NV96 361 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 HSF4Q9ULV5 492 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 ASB1Q9Y576 335 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 GP1BAP07359 652 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 ACAA1P09110 424 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC25A53Q5H9E4 307 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 TCTEX1D1Q8N7M0 179 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 OR2V2Q96R30 315 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 FOXD3Q9UJU5 478 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 IFITM2Q01629 132 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 Q71RC1 249 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 OR6X1Q8NH79 312 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 SPOCK3Q9BQ16 436 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 SOSTQ9BQB4 213 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM200CA6NKL6 621 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 BCL2L10Q9HD36 194 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 PIPOXQ9P0Z9 390 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 FLVCR2Q9UPI3 526 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 CACNA1GO43497 2377 aa9.6□□□□□ -0.87
CACNA1C-216ENST00000399638 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 A6NJY4 79 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SYS1Q8N2H4 156 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 TOLLIPQ9H0E2 274 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 RASL12Q9NYN1 266 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 NAT8Q9UHE5 227 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CD74P04233 296 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CYB5R2Q6BCY4 276 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 ZNF318Q5VUA4 2279 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CXorf51AA0A1B0GTR3 108 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 GDF9O60383 454 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SELENOPP49908 381 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC37A1P57057 533 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 UBE2L3P68036 154 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 OR52I2Q8NH67 350 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 MYEOVQ96EZ4 313 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 LINC00470Q9BZP3 86 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 TRBV5-3A0A0A0MS03 114 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SLC17A2O00624 439 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SFTA3P0C7M3 94 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 HIST3H3Q16695 136 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 MARCH1Q8TCQ1 289 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 UQCC1Q9NVA1 299 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CLDN14O95500 239 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CDKN1AP38936 164 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 OR4X1Q8NH49 305 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 CHST2Q9Y4C5 530 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 NPFFO15130 113 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 V9GYH0 126 aa9.59□□□□□ -0.87
CACNA1C-216ENST00000399638 EP300Q09472 2414 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 CTSVO60911 334 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 HINT1P49773 126 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 AESQ08117 197 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 CD226Q15762 336 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 RNF212Q495C1 297 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 HGDQ93099 445 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 A0A0A6YYD5 115 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 IGHV1-69-2A0A0G2JMI3 117 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 COX6CP09669 75 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 CISD3P0C7P0 127 aa9.58□□□□□ -0.88
CACNA1C-216ENST00000399638 PNLIPP16233 465 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms