RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 A0A1W2PRD5 423 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 A0A1W2PRF3 423 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 A0A1W2PRM7 423 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 LEUTXA8MZ59 168 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 TRDCB7Z8K6 153 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 BUB1B-PAK6H3BSN5 160 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 TRIM77I1YAP6 450 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 ITGB1BP1O14713 200 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 IER3P46695 156 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 RPL15P61313 204 aaKnown RBP14.32□□□□□ -0.12
CTNS-203ENST00000399306 BAMBIQ13145 260 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 BAIAP2L2Q6UXY1 529 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 OR4A4PQ8NGN8 299 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 OR1L1Q8NH94 360 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 CYYR1Q96J86 154 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 GNG12Q9UBI6 72 aa14.32□□□□□ -0.12
CTNS-203ENST00000399306 LY6LH3BQJ8 138 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 VENTXO95231 258 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 RNASE1P07998 156 aaKnown RBP14.31□□□□□ -0.12
CTNS-203ENST00000399306 MNDAP41218 407 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 ARHGDIBP52566 201 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 ZNF137PP52743 207 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 GNG2P59768 71 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 CCDC144NLQ6NUI1 221 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 SLC25A48Q6ZT89 311 aaKnown RBP14.31□□□□□ -0.12
CTNS-203ENST00000399306 FAM216AQ8WUB2 273 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 TOLLIPQ9H0E2 274 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 GHITMQ9H3K2 345 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 AUNIPQ9H7T9 357 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 ESM1Q9NQ30 184 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 OR2S2Q9NQN1 319 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 COMMD3Q9UBI1 195 aa14.31□□□□□ -0.12
CTNS-203ENST00000399306 SOX21Q9Y651 276 aaPredicted RBP14.31□□□□□ -0.12
CTNS-203ENST00000399306 A0A075B6Q4 140 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 TRAV18A0A075B6X5 111 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 MDFIC2A0A1B0GVS7 189 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 DNAJC9-AS1A6NH13 148 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 CBX5P45973 191 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 UBA52P62987 128 aaKnown RBP14.3□□□□□ -0.12
CTNS-203ENST00000399306 MADCAM1Q13477 382 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 SLC9A3R2Q15599 337 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 LRRC75BQ2VPJ9 315 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 MORN2Q502X0 79 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 LHFPL4Q7Z7J7 247 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 PRR18Q8N4B5 295 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 ZNF439Q8NDP4 499 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 SETD6Q8TBK2 473 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 CABLES2Q9BTV7 478 aa14.3□□□□□ -0.12
CTNS-203ENST00000399306 RSL24D1Q9UHA3 163 aaKnown RBP14.3□□□□□ -0.12
CTNS-203ENST00000399306 BTBD17A6NE02 478 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 TMEM235A6NFC5 223 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 FABP7O15540 132 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 HOXA3O43365 443 aaPredicted RBP14.29□□□□□ -0.12
CTNS-203ENST00000399306 ZBTB25P24278 435 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 IL3RAP26951 378 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 RAB7AP51149 207 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 LTC4SQ16873 150 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 TMEM69Q5SWH9 247 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 LDLRAD2Q5SZI1 272 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 TPTE2P1Q5T6R2 138 aa14.29□□□□□ -0.12
CTNS-203ENST00000399306 EIF4EP06730 217 aaKnown RBP14.28□□□□□ -0.12
CTNS-203ENST00000399306 CTXN2P0C2S0 81 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 TAS2R20P59543 309 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 OR8H3Q8N146 312 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 OR10X1Q8NGY0 326 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 UBALD1Q8TB05 177 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 C17orf50Q8WW18 174 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 EDARADDQ8WWZ3 215 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 TMEM158Q8WZ71 300 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 SLIRPQ9GZT3 109 aaKnown RBP14.28□□□□□ -0.12
CTNS-203ENST00000399306 RABL2AQ9UBK7 228 aaPredicted RBP14.28□□□□□ -0.12
CTNS-203ENST00000399306 ADAM30Q9UKF2 790 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 RABL2BQ9UNT1 228 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 A3GALT2U3KPV4 340 aa14.28□□□□□ -0.12
CTNS-203ENST00000399306 IGHV3-43A0A0B4J1X8 118 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 FAM172BPA6NC97 362 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 CCDC160A6NGH7 325 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 TXNL1O43396 289 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 HPGDSO60760 199 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 LPLP06858 475 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 SCTP09683 121 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 IGHV3-43DP0DP04 118 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 ELK1P19419 428 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 BRS3P32247 399 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 ZNF816Q0VGE8 651 aaPredicted RBP14.27□□□□□ -0.13
CTNS-203ENST00000399306 SSX2Q16385 188 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 CT45A1Q5HYN5 189 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 UTF1Q5T230 341 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 FAM71F2Q6NXP2 309 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 C16orf87Q6PH81 154 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 OR52L2PQ8NGH6 319 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 CT45A3Q8NHU0 189 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 LEAP2Q969E1 77 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 RPEQ96AT9 228 aa14.27□□□□□ -0.13
CTNS-203ENST00000399306 DGCR14Q96DF8 476 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms