RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PNLIPRP3Q17RR3 467 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 ZNF554Q86TJ5 538 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 LAX1Q8IWV1 398 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 MAFIPQ8WZ33 124 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 CLEC7AQ9BXN2 247 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 C6orf62Q9GZU0 229 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-203ENST00000398137 MIXL1Q9H2W2 232 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 RAB9BQ9NP90 201 aa20.65■□□□□ 0.9
U2AF1-203ENST00000398137 F2RL2O00254 374 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 IGHV3-7P01780 117 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 ARG1P05089 322 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 SAA4P35542 130 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 HLA-DRB3P79483 266 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 FAM53AQ6NSI3 398 aaPredicted RBP20.64■□□□□ 0.89
U2AF1-203ENST00000398137 ABHD12Q8N2K0 398 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 OR10A7Q8NGE5 316 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 MCFD2Q8NI22 146 aa20.64■□□□□ 0.89
U2AF1-203ENST00000398137 ZNF230Q9UIE0 474 aaPredicted RBP20.64■□□□□ 0.89
U2AF1-203ENST00000398137 ODF3BA8MYP8 253 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 SSX5O60225 188 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 CD34P28906 385 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 MNDAP41218 407 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 BPIFB3P59826 476 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 FOXL1Q12952 345 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 OR11H6Q8NGC7 330 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 ZNF747Q9BV97 191 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 GFOD1Q9NXC2 390 aa20.63■□□□□ 0.89
U2AF1-203ENST00000398137 TRRAPQ9Y4A5 3859 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 A0A087X0M5 115 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 A0A0U1RQK1 487 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 A0A1B0GX30 115 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 MEIOCA2RUB1 952 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 POM121CA8CG34 1229 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 HOXA3O43365 443 aaPredicted RBP20.62■□□□□ 0.89
U2AF1-203ENST00000398137 GNG10P50151 68 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 LOXL3P58215 753 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 PITPNAQ00169 270 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 ZNF626Q68DY1 528 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 OR10V1Q8NGI7 309 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 IL1F10Q8WWZ1 152 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 GNG12Q9UBI6 72 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 EXTL2Q9UBQ6 330 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 MGAT4AQ9UM21 535 aa20.62■□□□□ 0.89
U2AF1-203ENST00000398137 MELTFP08582 738 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 DTYMKP23919 212 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 GNMTQ14749 295 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 TMEM30BQ3MIR4 351 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 MIDNQ504T8 468 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 OR52L2PQ8NGH6 319 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 OR52M1Q8NGK5 317 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 GALMQ96C23 342 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 NXF2Q9GZY0 626 aaKnown RBP20.61■□□□□ 0.89
U2AF1-203ENST00000398137 ZNRD1Q9P1U0 126 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 ADAM30Q9UKF2 790 aa20.61■□□□□ 0.89
U2AF1-203ENST00000398137 MRPS7Q9Y2R9 242 aaKnown RBP20.61■□□□□ 0.89
U2AF1-203ENST00000398137 TRDCB7Z8K6 153 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 SCTP09683 121 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 LGALS4P56470 323 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 Q6YL49 198 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 C17orf50Q8WW18 174 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 OR2S2Q9NQN1 319 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 PSG11Q9UQ72 335 aa20.6■□□□□ 0.89
U2AF1-203ENST00000398137 C16orf87Q6PH81 154 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 CNIH2Q6PI25 160 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 LHFPL4Q7Z7J7 247 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 SNX29P2Q8IUI4 249 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 OR9G1Q8NH87 305 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 ST6GALNAC5Q9BVH7 336 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 JPT1Q9UK76 154 aa20.59■□□□□ 0.89
U2AF1-203ENST00000398137 IGKV1D-8A0A087WSZ0 117 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 A0A1W2PPE3 182 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 A6NHS1 94 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 TOR1AO14656 332 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 FABP7O15540 132 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 HLA-DQB1P01920 261 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 PPP1CCP36873 323 aaKnown RBP20.58■□□□□ 0.89
U2AF1-203ENST00000398137 KIR2DS4P43632 304 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 KIR2DS1Q14954 304 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 OR4P4Q8NGL7 312 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 ZNF596Q8TC21 504 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 FAM96BQ9Y3D0 163 aa20.58■□□□□ 0.89
U2AF1-203ENST00000398137 IGKV1-6A0A0C4DH72 117 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 MEIS3P1A6NDR6 274 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 IGLV1-47P01700 117 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 HTD2P86397 168 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 LDLRAD2Q5SZI1 272 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 BEND2Q8NDZ0 799 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 SGMS2Q8NHU3 365 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 AJUBAQ96IF1 538 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 OR1A1Q9P1Q5 309 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 SLC23A1Q9UHI7 598 aa20.57■□□□□ 0.88
U2AF1-203ENST00000398137 J3QR06 171 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 FCER2P06734 321 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 GSTT2P0CG29 244 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 GSTT2BP0CG30 244 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 MDKP21741 143 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-203ENST00000398137 PAX6P26367 422 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 PRRX1P54821 245 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 HERPUD1Q15011 391 aa20.56■□□□□ 0.88
U2AF1-203ENST00000398137 HLA-DRB5Q30154 266 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms