RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CDC34P49427 236 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 HIST1H3AP68431 136 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CFHR1Q03591 330 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 KCNMB1Q16558 191 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 C10orf128Q5T292 105 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 NUFIP2Q7Z417 695 aaKnown RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CLDND2Q8NHS1 167 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PHF7Q9BWX1 381 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SRXN1Q9BYN0 137 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 OR2D2Q9H210 308 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PARD6AQ9NPB6 346 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GLRX2Q9NS18 164 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 DUXBA0A1W2PPF3 345 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 DEFB108AA8MXU0 73 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 C11orf94C9JXX5 98 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 H0Y980 276 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 NGFP01138 241 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SOD3P08294 240 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 OR3A1P47881 315 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 STARD6P59095 220 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 KRTDAPP60985 99 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 DCAF12Q5T6F0 453 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 NFAM1Q8NET5 270 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GALMQ96C23 342 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 RCC1LQ96I51 464 aaKnown RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 STRADBQ9C0K7 418 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CLN8Q9UBY8 286 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 FOXD3Q9UJU5 478 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 KIAA2026Q5HYC2 2103 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PROB1E7EW31 1015 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 ARR3P36575 388 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SERF2P84101 59 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SLC10A1Q14973 349 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CHRNA10Q9GZZ6 450 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PNRC2Q9NPJ4 139 aaKnown RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IL36RNQ9UBH0 155 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TINAGQ9UJW2 476 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 ATP23Q9Y6H3 246 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 ICE1Q9Y2F5 2266 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 WDR87Q6ZQQ6 2873 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGHV3-43A0A0B4J1X8 118 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGKV1D-13A0A0B4J2D9 117 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGKV1-12A0A0C4DH73 117 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 M0R143 59 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGKV1D-12P01611 117 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GYPAP02724 150 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGHV3-43DP0DP04 118 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGKV1-13P0DP09 117 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 NTF3P20783 257 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 G6PCP35575 357 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CD81P60033 236 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 FGF12P61328 243 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 BTNL3Q6UXE8 466 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 DPPA3Q6W0C5 159 aa9.56□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GCH1P30793 250 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GPX4P36969 197 aaPredicted RBP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 RTP5Q14D33 572 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TBC1D28Q2M2D7 210 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 ZNF468Q5VIY5 522 aaPredicted RBP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TGIF2LXQ8IUE1 241 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TMEM171Q8WVE6 324 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CIB3Q96Q77 187 aaPredicted RBP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TMEM147Q9BVK8 224 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 HS3ST3B1Q9Y662 390 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 A0A087WWC5 75 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 EGR1P18146 543 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TUSC5Q8IXB3 177 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 OR5D13Q8NGL4 314 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TAF15Q92804 592 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 WNT5BQ9H1J7 359 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CISD1Q9NZ45 108 aaKnown RBP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TAAR3PQ9P1P4 343 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IL17BQ9UHF5 180 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TIMM8AO60220 97 aaPredicted RBP9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGHV3-13P01766 116 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGHV3-7P01780 117 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 LIME1Q9H400 295 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 DOCK8Q8NF50 2099 aa9.55□□□□□ -0.88
CSGALNACT1-202ENST00000397998 KIF26AQ9ULI4 1882 aaPredicted RBP9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GVINP1Q7Z2Y8 2422 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 IGKV1-27A0A075B6S5 117 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SPINT2O43291 252 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 GDF9O60383 454 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PMELP40967 661 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CYB5R2Q6BCY4 276 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SPINK14Q6IE38 97 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SPEM1Q8N4L4 309 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 TMEM54Q969K7 222 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 MTCH1Q9NZJ7 389 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 OR1A1Q9P1Q5 309 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 SIT1Q9Y3P8 196 aa9.54□□□□□ -0.88
CSGALNACT1-202ENST00000397998 CHCHD2Q9Y6H1 151 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms