RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 VDAC1P21796 283 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 HOXD11P31277 338 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-204ENST00000397606 GLIPR1P48060 266 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 ELP2Q6IA86 826 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 ACOT7LQ6ZUV0 252 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 RBMXL1Q96E39 390 aaKnown RBP7.02□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF649Q9BS31 505 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 TRBV23-1A0A0A0MS06 115 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 DPRXA6NFQ7 191 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 RCC1P18754 421 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-204ENST00000397606 CDKN1AP38936 164 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 ASPHD2Q6ICH7 369 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 OR52L2PQ8NGH6 319 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 PERPQ96FX8 193 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 NRIP2Q9BQI9 281 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 MAGT1Q9H0U3 335 aa7.02□□□□□ -1.29
PTPRD-204ENST00000397606 ZGRF1Q86YA3 2104 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 CACNA1AO00555 2505 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 CLEC18AA5D8T8 446 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 IAPPP10997 89 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 RPL12P30050 165 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 CLEC18BQ6UXF7 455 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 WDR82Q6UXN9 313 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 LIAT1Q6ZQX7 453 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 CLEC18CQ8NCF0 446 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 FLYWCH2Q96CP2 140 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 LURAP1Q96LR2 239 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 ARID1AO14497 2285 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 FER1L5A0AVI2 2057 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 MPDZO75970 2070 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 THBDP07204 575 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 PSG2P11465 335 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 NQO2P16083 231 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 F2RP25116 425 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 TLE4Q04727 773 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 HNF4GQ14541 408 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 LRP11Q86VZ4 500 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 OR1L1Q8NH94 360 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 ALX4Q9H161 411 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF318Q5VUA4 2279 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 POM121CA8CG34 1229 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 GAPDHP04406 335 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM255AQ5JRV8 349 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 GGNBP1Q5YKI7 109 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 TCTEX1D1Q8N7M0 179 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 HSD17B11Q8NBQ5 300 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 PINX1Q96BK5 328 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 R3HDM4Q96D70 268 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 RAB40CQ96S21 281 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 UNKLQ9H9P5 680 aaKnown RBP7.01□□□□□ -1.29
PTPRD-204ENST00000397606 CACNG5Q9UF02 275 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 MED13Q9UHV7 2174 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 JTBO76095 146 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 MELTFP08582 738 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 MC5RP33032 325 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 KHDC1LQ5JSQ8 128 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 NTNG2Q96CW9 530 aa7.01□□□□□ -1.29
PTPRD-204ENST00000397606 PHF3Q92576 2039 aaKnown RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 A0A1B0GV50 99 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF705EA8MWA4 302 aaPredicted RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 SMLR1H3BR10 107 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 MEF2CQ06413 473 aaPredicted RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 FAM201AQ5SY85 155 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF66Q6ZN08 573 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 Q6ZRG5 221 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 HPSE2Q8WWQ2 592 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 MS4A7Q9GZW8 240 aaPredicted RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 CRIM1Q9NZV1 1036 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 RPS10-NUDT3A0A1W2PQS6 291 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 I3L521 148 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ARG1P05089 322 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ZNF250P15622 560 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ARF6P62330 175 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 COLCA1Q6ZS62 124 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ZCCHC24Q8N2G6 241 aaKnown RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 OR9G1Q8NH87 305 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 HARBI1Q96MB7 349 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 COL4A2P08572 1712 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 E9PQ18 207 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 CT45A6P0DMU7 189 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 CT45A5P0DMU8 189 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 CT45A7P0DMV0 189 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 NTF4P34130 210 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 CT45A1Q5HYN5 189 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 TMEM42Q69YG0 159 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 FAM216BQ8N7L0 139 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 CT45A3Q8NHU0 189 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 MOB3AQ96BX8 217 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 LRP4O75096 1905 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 POLEQ07864 2286 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 PKDREJQ9NTG1 2253 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 ACACBO00763 2458 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 IGF2RP11717 2491 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 A0A1W2PPE3 182 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 PLAC9Q5JTB6 97 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 OR4D10Q8NGI6 311 aa7□□□□□ -1.29
PTPRD-204ENST00000397606 GNPNAT1Q96EK6 184 aaPredicted RBP7□□□□□ -1.29
PTPRD-204ENST00000397606 SSBP3Q9BWW4 388 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms