RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 HERV-K104P61576 105 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 LMO4P61968 165 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 LCN2P80188 198 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 LHFPL1Q86WI0 220 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 CORO2AQ92828 525 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 LEAP2Q969E1 77 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 RPUSD1Q9UJJ7 312 aaKnown RBP17.46■□□□□ 0.39
CPNE1-204ENST00000397443 VSIG4Q9Y279 399 aa17.46■□□□□ 0.39
CPNE1-204ENST00000397443 TRBV23-1A0A0A0MS06 115 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 PPIAL4CA0A0B4J2A2 164 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 ZNF729A6NN14 1252 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 VWC2LB2RUY7 222 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 INMT-MINDY4F8WBC2 141 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 DIRAS3O95661 229 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 PPIAL4GP0DN37 164 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 ZFP36P26651 326 aaKnown RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 UTF1Q5T230 341 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 ZNF554Q86TJ5 538 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 H1FOOQ8IZA3 346 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 GIMAP1Q8WWP7 306 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 SLC25A21Q9BQT8 299 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 GAL3ST2Q9H3Q3 398 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 LPAR2Q9HBW0 351 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 LPAR3Q9UBY5 353 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 GPR37O15354 613 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 ZNF728P0DKX0 622 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 ANXA7P20073 488 aaKnown RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 Q6ZNX1 250 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 SECTM1Q8WVN6 248 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 FXYD6Q9H0Q3 95 aa17.45■□□□□ 0.38
CPNE1-204ENST00000397443 RBM7Q9Y580 266 aaKnown RBP17.45■□□□□ 0.38
CPNE1-204ENST00000397443 LOC105371242A0A075B767 164 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 IGKV1D-13A0A0B4J2D9 117 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 HEXAP06865 529 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 IGKV1-13P0DP09 117 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 DSCR9P59020 149 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 Q5PR19 223 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 MARVELD1Q9BSK0 173 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 TAS2R3Q9NYW6 316 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 ONECUT1Q9UBC0 465 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 OPN4Q9UHM6 478 aa17.44■□□□□ 0.38
CPNE1-204ENST00000397443 FPR2P25090 351 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 PRB3Q04118 309 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-204ENST00000397443 RAB39BQ96DA2 213 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 IDI2-AS1Q9NZ38 188 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 OR2W1Q9Y3N9 320 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 NPIPB11E5RHQ5 1161 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 F2RL2O00254 374 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 TUSC2O75896 110 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 DLX1P56177 255 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 LOXL3P58215 753 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 HTD2P86397 168 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 DACT3Q96B18 629 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-204ENST00000397443 MOB3AQ96BX8 217 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 RNF150Q9ULK6 438 aa17.43■□□□□ 0.38
CPNE1-204ENST00000397443 ABCA2Q9BZC7 2435 aa17.42■□□□□ 0.38
CPNE1-204ENST00000397443 OR8U9P0C7N5 309 aa17.42■□□□□ 0.38
CPNE1-204ENST00000397443 ADAD2Q8NCV1 583 aaKnown RBP17.42■□□□□ 0.38
CPNE1-204ENST00000397443 OR8U1Q8NH10 309 aa17.42■□□□□ 0.38
CPNE1-204ENST00000397443 CAPSLQ8WWF8 208 aa17.42■□□□□ 0.38
CPNE1-204ENST00000397443 RAB9BQ9NP90 201 aa17.42■□□□□ 0.38
CPNE1-204ENST00000397443 A0A1W2PPE3 182 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 KIAA1324LA8MWY0 1029 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-204ENST00000397443 FAM157AC9JC47 383 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 AKR1C4P17516 323 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 LDLRAD3Q86YD5 345 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 LRRC75A-AS1Q8N1F1 130 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 KCNS2Q9ULS6 477 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 A0A0B4J293 547 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 HSD17B6O14756 317 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 PEX14O75381 377 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 GNG10P50151 68 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 DLX6P56179 175 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 ARF6P62330 175 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 TATDN3Q17R31 274 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 CD276Q5ZPR3 534 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 SLC5A7Q9GZV3 580 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 C5orf66Q9H5L9 145 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 GFOD1Q9NXC2 390 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 JPT1Q9UK76 154 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 GPR132Q9UNW8 380 aa17.41■□□□□ 0.38
CPNE1-204ENST00000397443 PRRC2AP48634 2157 aaKnown RBP17.41■□□□□ 0.38
CPNE1-204ENST00000397443 NOTCH2Q04721 2471 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 PDZD2O15018 2839 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 ST8SIA5O15466 376 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 LIPFP07098 398 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 LUMP51884 338 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-204ENST00000397443 MORN2Q502X0 79 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 PHLDA2Q53GA4 152 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 HEPN1Q6WQI6 88 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 ZDHHC22Q8N966 263 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 MAPK1IP1LQ8NDC0 245 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 MBD6Q96DN6 1003 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 SUCNR1Q9BXA5 334 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 CCL28Q9NRJ3 127 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 PSG11Q9UQ72 335 aa17.4■□□□□ 0.38
CPNE1-204ENST00000397443 VSIG10L2P0DP72 767 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 C8orf46Q8TAG6 207 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 GPHA2Q96T91 129 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 RTBDNQ9BSG5 229 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms