RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TPTE2P1Q5T6R2 138 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 OR52L2PQ8NGH6 319 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 OR10X1Q8NGY0 326 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 SLC25A46Q96AG3 418 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 GALMQ96C23 342 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 JPT1Q9UK76 154 aa17.1■□□□□ 0.33
TSPAN4-206ENST00000397408 SERPINE3A8MV23 424 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 LY6LH3BQJ8 138 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 SCGNO76038 276 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 CRYBA1P05813 215 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 HKR1P10072 659 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 RAB13P51153 203 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 HLA-DRB3P79483 266 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 MADCAM1Q13477 382 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 GNMTQ14749 295 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 PIFOQ8TCI5 191 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 IL1F10Q8WWZ1 152 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 TOMM40LQ969M1 308 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 RPEQ96AT9 228 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 Q9N2K0 584 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 MGAT4AQ9UM21 535 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 SPATA2Q9UM82 520 aa17.09■□□□□ 0.33
TSPAN4-206ENST00000397408 TMEM89A2RUT3 159 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 SLC31A2O15432 143 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 HTD2P86397 168 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 ARFRP1Q13795 201 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 ARL6IP1Q15041 203 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 Q3ZCU0 254 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 C8orf31Q8N9H6 132 aa17.08■□□□□ 0.32
TSPAN4-206ENST00000397408 FCGR3AP08637 254 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 PPP1CCP36873 323 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 DYNLT3P51808 116 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 ARHGDIBP52566 201 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 RPL15P61313 204 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 DHRS7BQ6IAN0 325 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 LINC00311Q8N616 119 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 ZNF439Q8NDP4 499 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 PHF21AQ96BD5 680 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 ELF5Q9UKW6 265 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
TSPAN4-206ENST00000397408 POM121CA8CG34 1229 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 OOSP1A8MZH6 123 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 RPL5P46777 297 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 CDNFQ49AH0 187 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 MORN2Q502X0 79 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 CCDC144NLQ6NUI1 221 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 SLC25A48Q6ZT89 311 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 CLVS1Q8IUQ0 354 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 OCSTAMPQ9BR26 566 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 DCSTAMPQ9H295 470 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 C1RLQ9NZP8 487 aa17.06■□□□□ 0.32
TSPAN4-206ENST00000397408 MNDAP41218 407 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 RELBQ01201 579 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 DIAPH2-AS1Q14236 149 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 CT45A1Q5HYN5 189 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 STEAP3Q658P3 488 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 CT45A3Q8NHU0 189 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 SPATA3Q8NHX4 192 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 KCTD12Q96CX2 325 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 SCOCQ9UIL1 159 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 DNHD1Q96M86 4753 aa17.05■□□□□ 0.32
TSPAN4-206ENST00000397408 TMEM235A6NFC5 223 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 TRDCB7Z8K6 153 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 HSD17B6O14756 317 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 YPEL1O60688 119 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 RGS11O94810 467 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 GSTP1P09211 210 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 SCTP09683 121 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 IL3RAP26951 378 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 BRS3P32247 399 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 TALDO1P37837 337 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 ZNF134P52741 427 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 ZNF260Q3ZCT1 412 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 HACD4Q5VWC8 232 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 TMEM219Q86XT9 240 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 SAMD12Q8N8I0 201 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 MAFIPQ8WZ33 124 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 YPEL2Q96QA6 119 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 ABHD14AQ9BUJ0 271 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 ZNF230Q9UIE0 474 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 A0A1W2PPI3 338 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 A6NDX4 124 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 CHST1O43916 411 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 COMPP49747 757 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 RAG2P55895 527 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 FOXL1Q12952 345 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 UBE2NLQ5JXB2 153 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 CCBE1Q6UXH8 406 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 C12orf54Q6X4T0 127 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 LIAT1Q6ZQX7 453 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 IZUMO1Q8IYV9 350 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 NUDCD2Q8WVJ2 157 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 RAB18Q9NP72 206 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 OR1A1Q9P1Q5 309 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 SLC23A1Q9UHI7 598 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 PITPNC1Q9UKF7 332 aa17.04■□□□□ 0.32
TSPAN4-206ENST00000397408 TRAV18A0A075B6X5 111 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 A0A0A6YYH2 397 aa17.03■□□□□ 0.32
TSPAN4-206ENST00000397408 A6NJ64 397 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms