RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SELENOTP62341 195 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 ATP5G2Q06055 141 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 PMS2P11Q13670 270 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 GVQW1Q8N7I0 195 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 COX14Q96I36 57 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SOSTQ9BQB4 213 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 ZDHHC8Q9ULC8 765 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 PSMB11A5LHX3 300 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 PLPP2O43688 288 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 DYNLT3P51808 116 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SCAND1P57086 179 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SURF2Q15527 256 aaPredicted RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 SSX1Q16384 188 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 KHDC3LQ587J8 217 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 RNF165Q6ZSG1 346 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SLC35E3Q7Z769 313 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SGMS2Q8NHU3 365 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 TOLLIPQ9H0E2 274 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 FXYD1O00168 92 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 GPX1P07203 203 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 ACAA1P09110 424 aaPredicted RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 SP9P0CG40 484 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 PGA4P0DJD7 388 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 PGA5P0DJD9 388 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 CSF2RBP32927 897 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 GZMKP49863 264 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 TMEM33P57088 247 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 C12orf73Q69YU5 71 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SLC16A13Q7RTY0 426 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 OR10D4PQ8NGN7 298 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 MZB1Q8WU39 189 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SGK494Q96LW2 274 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 MRPS18BQ9Y676 258 aaKnown RBP6.27□□□□□ -1.41
UPF2-203ENST00000397053 A0A0J9YW62 118 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 CEACAM18A8MTB9 384 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 SYNGR3O43761 229 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 ADAP1O75689 374 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 MPC2O95563 127 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 NRN1LQ496H8 165 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 DDA1Q9BW61 102 aa6.27□□□□□ -1.41
UPF2-203ENST00000397053 A0A1B0GTL3 188 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 LIPFP07098 398 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 NPPCP23582 126 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 ERVS71-1P61550 626 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 RPL8P62917 257 aaKnown RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 PSG6Q00889 435 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 MGAT2Q10469 447 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 ZNF343Q6P1L6 599 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 REC114Q7Z4M0 266 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 GCSAMQ8N6F7 178 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 HMGCLL1Q8TB92 370 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 ZNF385AQ96PM9 386 aaKnown RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 MYH7BA7E2Y1 1941 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 FMN2Q9NZ56 1722 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 A6NJY4 79 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 SOCS1O15524 211 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 SLC25A17O43808 307 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 HPRT1P00492 218 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 PNRC1Q12796 327 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 TMEM255AQ5JRV8 349 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 OR4A47Q6IF82 309 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 CADM3Q8N126 398 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 OR8G5Q8NG78 346 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 LINC01560Q8TB33 94 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 HSPB7Q9UBY9 170 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 PTPRQQ9UMZ3 2332 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 PIK3C2AO00443 1686 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 A8MWL6 223 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 PAGE4O60829 102 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 SRSF10O75494 262 aaKnown RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 OR10J1P30954 320 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 CLEC18BQ6UXF7 455 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 ATG4DQ86TL0 474 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 OR4C13Q8NGP0 309 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 GALNT14Q96FL9 552 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 POM121Q96HA1 1249 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 ZNF488Q96MN9 340 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 TMEFF2Q9UIK5 374 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 MYH1P12882 1939 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 IGHV3-35A0A0C4DH35 117 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 UPK3AO75631 287 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 LINC00869P0C866 280 aa6.26□□□□□ -1.41
UPF2-203ENST00000397053 FGF9P31371 208 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 FCGR2BP31994 310 aaPredicted RBP6.26□□□□□ -1.41
UPF2-203ENST00000397053 DYRK2Q92630 601 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms