RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 Q8N9W7 124 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 C4orf3Q8WVX3 66 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 GALMQ96C23 342 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 TAF9BQ9HBM6 251 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 PNMA8CA0A1B0GUJ8 204 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
DDR1-229ENST00000396342 CD40LGP29965 261 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 RANBP1P43487 201 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 PLGLAQ15195 96 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 LRRC36Q1X8D7 754 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 NKAPLQ5M9Q1 402 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 C8orf59Q8N0T1 100 aaPredicted RBP12.88□□□□□ -0.35
DDR1-229ENST00000396342 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 DUX3Q96PT4 197 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 UQCC2Q9BRT2 126 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 ABHD14AQ9BUJ0 271 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 BANF2Q9H503 90 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
DDR1-229ENST00000396342 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
DDR1-229ENST00000396342 JPT1Q9UK76 154 aa12.88□□□□□ -0.35
DDR1-229ENST00000396342 A0A1W2PPK0 400 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 PDCD6O75340 191 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 LY86O95711 162 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 IGHG4P01861 327 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 CELP19835 753 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 MYF6P23409 242 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 ECI1P42126 302 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 INSL3P51460 131 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 ZNF137PP52743 207 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 Q8N6K4 173 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 ORAI1Q96D31 301 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
DDR1-229ENST00000396342 CLEC2DQ9UHP7 191 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
DDR1-229ENST00000396342 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 A0A1W2PP11 408 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
DDR1-229ENST00000396342 WNT4P56705 351 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 CT45A1Q5HYN5 189 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 GLT8D1Q68CQ7 371 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 OR1L1Q8NH94 360 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 CT45A3Q8NHU0 189 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 ABHD5Q8WTS1 349 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 PARP11Q9NR21 331 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 ZNF581Q9P0T4 197 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 RNF150Q9ULK6 438 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 VSIG4Q9Y279 399 aa12.86□□□□□ -0.35
DDR1-229ENST00000396342 ERICH4A6NGS2 130 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 IGF1P05019 195 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
DDR1-229ENST00000396342 ACTBP60709 375 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 HTD2P86397 168 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 TMEM267Q0VDI3 215 aaPredicted RBP12.85□□□□□ -0.35
DDR1-229ENST00000396342 LSAMPQ13449 338 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 ZNF260Q3ZCT1 412 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 MORN2Q502X0 79 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 FAM71E2Q8N5Q1 922 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 MS4A15Q8N5U1 240 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 RNF152Q8N8N0 203 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 OR11H1Q8NG94 326 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 IL1F10Q8WWZ1 152 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 FAM46BQ96A09 425 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
DDR1-229ENST00000396342 TRBV5-7A0A0A0MS05 114 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 TRAV41A0A0B4J266 112 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 SLC31A2O15432 143 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 NBR2O15453 112 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 CD1AP06126 327 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 OR1N2Q8NGR9 330 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 KCNG3Q8TAE7 436 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 GGHQ92820 318 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 UBE2E2Q96LR5 201 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 Q96M66 194 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 PLSCR3Q9NRY6 295 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 PIPOXQ9P0Z9 390 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 U3KQK5 164 aa12.84□□□□□ -0.35
DDR1-229ENST00000396342 ZNF736B4DX44 427 aaPredicted RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 HSPA12AO43301 675 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 YPEL1O60688 119 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms