RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CTSDP07339 412 aaPredicted RBP16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 OR4E1P0C645 316 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 PAX1P15863 534 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 OMGP23515 440 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 KRTAP10-9P60411 292 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 GNMTQ14749 295 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 WDR25Q64LD2 544 aaPredicted RBP16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 LPCAT3Q6P1A2 487 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 FAM168AQ92567 244 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 ZNF714Q96N38 554 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 SLC5A7Q9GZV3 580 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 GHITMQ9H3K2 345 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 JPT1Q9UK76 154 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 USP9YO00507 2555 aaPredicted RBP16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 IGKV1D-13A0A0B4J2D9 117 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 IGKV1-13P0DP09 117 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 PPP1CCP36873 323 aaKnown RBP16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 GNB2P62879 340 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 ABCA11PQ4W5N1 156 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 OR10V1Q8NGI7 309 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 OR52B4Q8NGK2 314 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 TOLLIPQ9H0E2 274 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 OR51J1Q9H342 316 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 GNG12Q9UBI6 72 aa16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 RBM7Q9Y580 266 aaKnown RBP16.85■□□□□ 0.29
VCPKMT-202ENST00000395860 F5H0A9 414 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 LUMP51884 338 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 HIST2H2BCQ6DN03 193 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 FAM53AQ6NSI3 398 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 FAHD2BQ6P2I3 314 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 CLEC2AQ6UVW9 174 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 FAHD2AQ96GK7 314 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 PIMREGQ9BSJ6 248 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 RSRP1Q9BUV0 290 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 GSX2Q9BZM3 304 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 IDI2-AS1Q9NZ38 188 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 CRYBG3Q68DQ2 2970 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 CREBL2O60519 120 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 CCL3L1P16619 93 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 TMEM128Q5BJH2 165 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 TMEM230Q96A57 120 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 SSBP3Q9BWW4 388 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 PARP12Q9H0J9 701 aaKnown RBP16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 LINC00574Q9H8X3 128 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 ZNF221Q9UK13 617 aa16.84■□□□□ 0.29
VCPKMT-202ENST00000395860 SNRPGP15A8MWD9 76 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 NDUFS8O00217 210 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 HLA-AP01891 365 aaKnown RBP16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 PIGPP57054 158 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 LOXL3P58215 753 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 UBE2MP61081 183 aaKnown RBP16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 PPP1R1AQ13522 171 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 ESCO2Q56NI9 601 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 ZNF626Q68DY1 528 aa16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 ZNF486Q96H40 463 aaPredicted RBP16.83■□□□□ 0.28
VCPKMT-202ENST00000395860 HSD17B6O14756 317 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 PHF1O43189 567 aaPredicted RBP16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 YPEL1O60688 119 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 PFDN1O60925 122 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 RGS11O94810 467 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 VAMP1P23763 118 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 NFYBP25208 207 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 GNRHRP30968 328 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 DHRS2Q13268 280 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 TMEM30BQ3MIR4 351 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 MORN2Q502X0 79 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 PHLDA2Q53GA4 152 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 PRAMEF5Q5TYX0 476 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 LDLRAD3Q86YD5 345 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 C10orf105Q8TEF2 133 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 YPEL2Q96QA6 119 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 CCL28Q9NRJ3 127 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 SLC2A9Q9NRM0 540 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 GFOD1Q9NXC2 390 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 RPUSD1Q9UJJ7 312 aaKnown RBP16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 SSNA1O43805 119 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 IGHV2-5P01817 119 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 OR8U9P0C7N5 309 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 DHODHQ02127 395 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 ZNF818PQ6ZRF7 136 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 LYG2Q86SG7 212 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 OR10A7Q8NGE5 316 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 OR8U1Q8NH10 309 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 ZNF431Q8TF32 576 aaPredicted RBP16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 EDARADDQ8WWZ3 215 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 MED28Q9H204 178 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 KCNS2Q9ULS6 477 aa16.82■□□□□ 0.28
VCPKMT-202ENST00000395860 A0A1W2PPH5 198 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 GPR31O00270 319 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 RRAS2P62070 204 aaPredicted RBP16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 CCDC71LQ8N9Z2 235 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 OR52M1Q8NGK5 317 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 CLDND2Q8NHS1 167 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 C8orf46Q8TAG6 207 aa16.81■□□□□ 0.28
VCPKMT-202ENST00000395860 PPIAL4CA0A0B4J2A2 164 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 TEX13DA0A0J9YY54 714 aaPredicted RBP16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 C9orf170A2RU37 121 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 HMX3A6NHT5 357 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 MMP23AO75900 390 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 PPIAL4GP0DN37 164 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms