RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DCSTAMPQ9H295 470 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 Q9N2K0 584 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 RAB9BQ9NP90 201 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 OR2S2Q9NQN1 319 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 VPREB3Q9UKI3 123 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 SPATA2Q9UM82 520 aa16.07■□□□□ 0.16
SNCA-203ENST00000394986 LEUTXA8MZ59 168 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 LY6LH3BQJ8 138 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 HLA-DRB3P79483 266 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 ZNF439Q8NDP4 499 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 OR10X1Q8NGY0 326 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 OR5R1Q8NH85 324 aa16.06■□□□□ 0.16
SNCA-203ENST00000394986 ZNF230Q9UIE0 474 aaPredicted RBP16.06■□□□□ 0.16
SNCA-203ENST00000394986 TMEM235A6NFC5 223 aa16.05■□□□□ 0.16
SNCA-203ENST00000394986 FCGR3AP08637 254 aa16.05■□□□□ 0.16
SNCA-203ENST00000394986 ZNF134P52741 427 aa16.05■□□□□ 0.16
SNCA-203ENST00000394986 MRPS15P82914 257 aaKnown RBP16.05■□□□□ 0.16
SNCA-203ENST00000394986 GALMQ96C23 342 aa16.05■□□□□ 0.16
SNCA-203ENST00000394986 SCOCQ9UIL1 159 aa16.05■□□□□ 0.16
SNCA-203ENST00000394986 AMMECR1Q9Y4X0 333 aaPredicted RBP16.05■□□□□ 0.16
SNCA-203ENST00000394986 SERPINE3A8MV23 424 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 VGLL3A8MV65 326 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 TMEM127O75204 238 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 SCTP09683 121 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 CD24P25063 80 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 ARFRP1Q13795 201 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 SPCS2Q15005 226 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 AANATQ16613 207 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 TMEM30BQ3MIR4 351 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 ZNF260Q3ZCT1 412 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 CT45A1Q5HYN5 189 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 SAMD12Q8N8I0 201 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 DTX3Q8N9I9 347 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 CT45A3Q8NHU0 189 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 NUDCD2Q8WVJ2 157 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 RPEQ96AT9 228 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 ABCB10Q9NRK6 738 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 JPT1Q9UK76 154 aa16.04■□□□□ 0.16
SNCA-203ENST00000394986 SCGNO76038 276 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 CEACAM3P40198 252 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 HTD2P86397 168 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 MADCAM1Q13477 382 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 MORN2Q502X0 79 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 FBLN7Q53RD9 439 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 SLC25A48Q6ZT89 311 aaKnown RBP16.03■□□□□ 0.16
SNCA-203ENST00000394986 GCDHQ92947 438 aaPredicted RBP16.03■□□□□ 0.16
SNCA-203ENST00000394986 TOMM40LQ969M1 308 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 CREB3L1Q96BA8 519 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 PHF21AQ96BD5 680 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 PARP12Q9H0J9 701 aaKnown RBP16.03■□□□□ 0.16
SNCA-203ENST00000394986 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNCA-203ENST00000394986 OR1A1Q9P1Q5 309 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 COMMD3Q9UBI1 195 aa16.03■□□□□ 0.16
SNCA-203ENST00000394986 TRAV18A0A075B6X5 111 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 REG1BP48304 166 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 RORCP51449 518 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 RELBQ01201 579 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 UBE2NLQ5JXB2 153 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 HACD4Q5VWC8 232 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 CCBE1Q6UXH8 406 aaPredicted RBP16.02■□□□□ 0.16
SNCA-203ENST00000394986 TMEM219Q86XT9 240 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 LINC00311Q8N616 119 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 OCSTAMPQ9BR26 566 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 ABCG5Q9H222 651 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 SLC23A1Q9UHI7 598 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 TCF19Q9Y242 345 aa16.02■□□□□ 0.16
SNCA-203ENST00000394986 IGKV1D-8A0A087WSZ0 117 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 IGKV1-6A0A0C4DH72 117 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 TRDCB7Z8K6 153 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 CHST1O43916 411 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 GSTP1P09211 210 aaKnown RBP16.02■□□□□ 0.15
SNCA-203ENST00000394986 HKR1P10072 659 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 PTHLHP12272 177 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 TALDO1P37837 337 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 HERPUD1Q15011 391 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 ARL6IP1Q15041 203 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 Q3ZCU0 254 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 C8orf31Q8N9H6 132 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 RAB2BQ8WUD1 216 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 KCTD12Q96CX2 325 aaKnown RBP16.02■□□□□ 0.15
SNCA-203ENST00000394986 C1RLQ9NZP8 487 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 MGAT4AQ9UM21 535 aa16.02■□□□□ 0.15
SNCA-203ENST00000394986 A0A1W2PPI3 338 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 TMEM89A2RUT3 159 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 HSD17B6O14756 317 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 SSX5O60225 188 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 CRYBA1P05813 215 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 EIF4EP06730 217 aaKnown RBP16.01■□□□□ 0.15
SNCA-203ENST00000394986 GSTT2P0CG29 244 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 GSTT2BP0CG30 244 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 DYNLT3P51808 116 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 GNG2P59768 71 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 STEAP3Q658P3 488 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 ABHD14AQ9BUJ0 271 aa16.01■□□□□ 0.15
SNCA-203ENST00000394986 A6NDX4 124 aa16■□□□□ 0.15
SNCA-203ENST00000394986 POM121CA8CG34 1229 aa16■□□□□ 0.15
SNCA-203ENST00000394986 TIMM23O14925 209 aa16■□□□□ 0.15
SNCA-203ENST00000394986 FABP7O15540 132 aa16■□□□□ 0.15
SNCA-203ENST00000394986 YPEL1O60688 119 aa16■□□□□ 0.15
SNCA-203ENST00000394986 TMBIM6P55061 237 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms