RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PRSS50Q9UI38 385 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PIEZO2Q9H5I5 2752 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 LY6G6EA0A0G2JKS1 128 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 KIR2DS1A0A191URI9 304 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 KIAA1324LA8MWY0 1029 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-202ENST00000394820 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
NFKB1-202ENST00000394820 ZNF17P17021 662 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-202ENST00000394820 KIR2DS4P43632 304 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 FABP6P51161 128 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 HTD2P86397 168 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 KIR2DS1Q14954 304 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 TMEM171Q8WVE6 324 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 CLDN23Q96B33 292 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
NFKB1-202ENST00000394820 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 GLRX2Q9NS18 164 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 U3KQA8 63 aa11.37□□□□□ -0.59
NFKB1-202ENST00000394820 UMODP07911 640 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 SLC25A6P12236 298 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 G6PCP35575 357 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ABHD17BQ5VST6 288 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 OR10A7Q8NGE5 316 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 Q9N2K0 584 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 OR1A1Q9P1Q5 309 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 IGLV3-12A0A075B6K2 115 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 LOC390937A0A1W2PQ73 354 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 SYNGR2O43760 224 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 HOXC12P31275 282 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 PCBD1P61457 104 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 OIT3Q8WWZ8 545 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ZDHHC11Q9H8X9 412 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 IFNL4K9M1U5 179 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 CD55P08174 381 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
NFKB1-202ENST00000394820 RFPL3SP0C7P2 107 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 DEFB108BQ8NET1 73 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 EDARADDQ8WWZ3 215 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 ATP5SQ99766 215 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 MRPL13Q9BYD1 178 aaKnown RBP11.36□□□□□ -0.59
NFKB1-202ENST00000394820 TREM2Q9NZC2 230 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
NFKB1-202ENST00000394820 IGKV1-27A0A075B6S5 117 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 GJE1A6NN92 205 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 IGHMP01871 453 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 ZNF90Q03938 601 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 ENDOGQ14249 297 aaKnown RBP11.35□□□□□ -0.59
NFKB1-202ENST00000394820 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 SSMEM1Q8WWF3 244 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 SRXN1Q9BYN0 137 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 ARRDC1-AS1Q9H2J1 176 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 TOX3O15405 576 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-202ENST00000394820 VAMP5O95183 116 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 FOSL1P15407 271 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 AGAP20933 346 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 UBE2NP61088 152 aaKnown RBP11.35□□□□□ -0.59
NFKB1-202ENST00000394820 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-202ENST00000394820 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 MS4A10Q96PG2 267 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 PLEKHA3Q9HB20 300 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 CDH20Q9HBT6 801 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
NFKB1-202ENST00000394820 IGHV1-45A0A0A0MS14 117 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 MDFIC2A0A1B0GVS7 189 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 CDIPTO14735 213 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 PTBP3O95758 552 aaKnown RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 RPS2P15880 293 aaKnown RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 PMCHP20382 165 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 HOXA5P20719 270 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 DUSP3P51452 185 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 EIF3IQ13347 325 aaKnown RBP11.34□□□□□ -0.59
NFKB1-202ENST00000394820 RAB35Q15286 201 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 ELOBQ15370 118 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 RNF151Q2KHN1 245 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 OR10P1Q8NGE3 313 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 TMEM18Q96B42 140 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 HIST1H3AP68431 136 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 DTX1Q86Y01 620 aa11.34□□□□□ -0.59
NFKB1-202ENST00000394820 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms