RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 FOLR2P14207 255 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 BAXQ07812 192 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 C1orf174Q8IYL3 243 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 STARD4Q96DR4 205 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 CXXC4Q9H2H0 198 aa12.94□□□□□ -0.34
UBE2D3-207ENST00000394801 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 KIAA1324LA8MWY0 1029 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 PSG2P11465 335 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 SNCAP37840 140 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 VAMP2P63027 116 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 P2RY6Q15077 328 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 IGFL3Q6UXB1 125 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 LSM10Q969L4 123 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF292O60281 2723 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 A0A0G2JRQ6 117 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 CHST1O43916 411 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 TSPAN15O95858 294 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 PAX6P26367 422 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 CD80P33681 288 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 PAX9P55771 341 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 CXorf67Q86X51 503 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 ZADH2Q8N4Q0 377 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 HSD17B11Q8NBQ5 300 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 PRR7Q8TB68 274 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
UBE2D3-207ENST00000394801 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 C9JQL5 133 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 AGPAT2O15120 278 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 HSPA12AO43301 675 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 PSPNO60542 156 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 MIDNQ504T8 468 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 PARP12Q9H0J9 701 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 SPENQ96T58 3664 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 CEACAM6P40199 344 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 CD200P41217 278 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 CAMLGP49069 296 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 PEA15Q15121 130 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 MBNL2Q5VZF2 373 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 SLC35E4Q6ICL7 350 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 Q6ZR03 302 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 SEM1Q6ZVN7 128 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 PRR18Q8N4B5 295 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 C2CD4CQ8TF44 421 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 C19orf12Q9NSK7 152 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 PROCRQ9UNN8 238 aa12.92□□□□□ -0.34
UBE2D3-207ENST00000394801 IGHV3-64DA0A0J9YX35 117 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 TMEM30CPA0ZSE6 113 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 OR5H1A6NKK0 313 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 COLCA2A8K830 154 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 K7N7A8 449 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.346e-9■■■■□ 22.8
UBE2D3-207ENST00000394801 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 FHITP49789 147 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 ASCL1P50553 236 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 RAB5BP61020 215 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 WDR82Q6UXN9 313 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 ACP7Q6ZNF0 438 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 EGLN1Q9GZT9 426 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 DSPP15924 2871 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 IGHV2OR16-5A0A0B4J2B6 119 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 IGHV1-18A0A0C4DH31 117 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 S100A8P05109 93 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 NFYBP25208 207 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 CLINT1Q14677 625 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 RTP5Q14D33 572 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF585BQ52M93 769 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF826PQ6ZT77 177 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 OR5C1Q8NGR4 320 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 OPN3Q9H1Y3 402 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 LIN7CQ9NUP9 197 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 OR14J1Q9UGF5 321 aa12.91□□□□□ -0.34
UBE2D3-207ENST00000394801 UMAD1C9J7I0 102 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 WRBO00258 174 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 TIMM8AO60220 97 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 ZNF616Q08AN1 781 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 Q6ZRM9 215 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 BEND4Q6ZU67 534 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms